LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g2213	ATGCTGCACCTCAAAATCTCTTGTGCTCCTTATCCTTTGTTTTGTTTGATCACTCTGAGCGTTGTTGCATTAATATCTACAGAAGCAGTTACTGATGAGACCTACGCGGTTCACTACTGTCCAAACACAACAACTTATTCTCCCAACAGCATTTACCAAACTACCCTCAACCAGCTCCTTTCATGGCTCACGTCGAACTCCTCAAGCGCCAAAAACGGTTACTACAACACTACCATCGGCGCCAACACCCCTAACAACACCATCTACGGCTCCTTCCTCTGCCGTGGAGACCTCACCACCACCGCATGCCACGACTGCGTTTCCGCCGCAGCCAAAAAGGTTCTTCAACCTGATTTCTGCCCCGTGGGGAAGGAATCGGTTATATGGTTCGCAGAGTGCATGGTTCGTTACTCGGACCAACCGTTTTTCTCTGTAGCTGCTGAGGTTCCTGTGTATTCCCTATCCAACACGGGAAACGTGCCAGATGAAAGCCACTTCATGACGGTGTTAGGAGACACGATGAATTCGGCGGCGGAACAGGCGGCGAAGGGTGGCGCTGACAAGAAATTTGGTACCAAAGAAGCAAACATTTCAAGCTTCCAGACTCTATACACGCTAGCACAGTGCACACCGGATTTGTCAGAATTTGGATGCCAGAAATGCCTCAAAATAGGAACTGGACAATTACCTTCTTGCTGTGATGGAAAGTTAGGAGGAAGAGTGCTGATTCCAAGTTGTAATGTTAGGTTTGAATTGTACCCCTTTTACCATGAGATGGATGTGCCTCTGCCACCGCCACAGTCCAACCCAAACCCAAAAGATAAATCCAATATAGATGCAGTATTAATAATCGCAATTGTAGTTCCAATTGTGATTGTTTTGTTGCTTTTCTTGGCTACCTTATGGATCATATCTACACGGACAAGAAGGAAGAAGAACAATTCCGTGCCAGAGGGAACTCTGGAAAGTAGTGTTCAAATTTCCAGCGTAGAGTTCTTGCAATTTGATGTTGATACAATCATAGAGGCCACAGACAACTTTTCTGGTGGCAATAAATTAGGGGAAGGAGGATTTGGTGAGGTTTACAAGGGTACACTACCTAATGGGCAAGATATTGCTGTGAAGAGACTATCAAGAAACTCTAGACAAGGAATAATTGAGTTTAAGAATGAGGTACTTTTGGTAGCCAAACTCCAACATAGAAATCTTGTTAGGCTACTCGGATTTTGCTTGGATGGAGAAGAGAAAATGCTCATCTACGAATTTGTTGCAAACAAAAGCTTGGACCGTTTTCTATTTGATGCCAGCAAACAACACCAGTTGAGTTGGCCAAGACGATACAAAATCATAGAAGGAATTGCTCGAGGAATACTCTATCTTCATGAAGATTCCCGACTCAGAATCATACATCGTGATCTTAAAGCCGGTAATATACTACTAGACGAGGATTCAAACCCAAAAATCTCAGATTTTGGAATGGCAAGACTTTTCGGTGCTGATCAAACTCAAGCAAACACCAATAGAGTTGTTGGAACAATTGGATACATGCCTCCAGAATATGCAATGCGTGGACACTTTTCTGATAAAACGGATGTCTACAGCTTCGGTGTCTTAGTTCTAGAGATAATATCAGGAAAGAAGATAACATCCTTCTATGATTCAGGCTATGCAGGGGACCTCTTGAACTATGCTTGGAAACATTGGAGAGATGGGACCCCATTGGAGCTACTAGACACGAGTCTGAGAGAATCATATTCAAGAGCCGAAGTAATTAAATGCATCCATGTTGGGTTATGCTGTGTACAAGAGGATCCAGCACAAAGACCAACAATGCAGGCTATAGTTCTAATGCTAAACAGCCATACAGTTACTCTTGCAAGTCCTGCACAACCACCAGCTGGTTATATTGGGAGCAGATCTCACTCCAATTTCCCAACAAAAGAGATGGTGAACTCATCATCAGACAAGTCTACAAACACAAGCACAAGTCAGAGTTCAATAAATCGGCCAACTTTGCCATCAAAGGAGATGGAAAACTCAAATGTGTCTACCTCCATTACAGAGGTCTACCCTCGCTAG	2079	0.4377	MLHLKISCAPYPLFCLITLSVVALISTEAVTDETYAVHYCPNTTTYSPNSIYQTTLNQLLSWLTSNSSSAKNGYYNTTIGANTPNNTIYGSFLCRGDLTTTACHDCVSAAAKKVLQPDFCPVGKESVIWFAECMVRYSDQPFFSVAAEVPVYSLSNTGNVPDESHFMTVLGDTMNSAAEQAAKGGADKKFGTKEANISSFQTLYTLAQCTPDLSEFGCQKCLKIGTGQLPSCCDGKLGGRVLIPSCNVRFELYPFYHEMDVPLPPPQSNPNPKDKSNIDAVLIIAIVVPIVIVLLLFLATLWIISTRTRRKKNNSVPEGTLESSVQISSVEFLQFDVDTIIEATDNFSGGNKLGEGGFGEVYKGTLPNGQDIAVKRLSRNSRQGIIEFKNEVLLVAKLQHRNLVRLLGFCLDGEEKMLIYEFVANKSLDRFLFDASKQHQLSWPRRYKIIEGIARGILYLHEDSRLRIIHRDLKAGNILLDEDSNPKISDFGMARLFGADQTQANTNRVVGTIGYMPPEYAMRGHFSDKTDVYSFGVLVLEIISGKKITSFYDSGYAGDLLNYAWKHWRDGTPLELLDTSLRESYSRAEVIKCIHVGLCCVQEDPAQRPTMQAIVLMLNSHTVTLASPAQPPAGYIGSRSHSNFPTKEMVNSSSDKSTNTSTSQSSINRPTLPSKEMENSNVSTSITEVYPR*	693

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy9g2213	692	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	16	651	-	-
	Ahy9g2213	692	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	16	651	-	-
	Ahy9g2213	692	SMART	serkin_6	347	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2213	692	ProSiteProfiles	Gnk2-homologous domain profile.	148	255	IPR002902	-
	Ahy9g2213	692	Pfam	Protein tyrosine and serine/threonine kinase	350	617	IPR001245	GO:0004672\|GO:0006468
	Ahy9g2213	692	CDD	STKc_IRAK	353	619	-	-
	Ahy9g2213	692	Gene3D	-	148	255	IPR038408	-
	Ahy9g2213	692	Gene3D	-	32	142	IPR038408	-
	Ahy9g2213	692	ProSiteProfiles	Protein kinase domain profile.	347	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2213	692	ProSitePatterns	Protein kinases ATP-binding region signature.	353	375	IPR017441	GO:0005524
	Ahy9g2213	692	Gene3D	Transferase(Phosphotransferase) domain 1	423	628	-	-
	Ahy9g2213	692	MobiDBLite	consensus disorder prediction	632	692	-	-
	Ahy9g2213	692	MobiDBLite	consensus disorder prediction	636	692	-	-
	Ahy9g2213	692	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	468	480	IPR008271	GO:0004672\|GO:0006468
	Ahy9g2213	692	Pfam	Salt stress response/antifungal	158	253	IPR002902	-
	Ahy9g2213	692	Pfam	Salt stress response/antifungal	40	139	IPR002902	-
	Ahy9g2213	692	SUPERFAMILY	Protein kinase-like (PK-like)	332	639	IPR011009	-
	Ahy9g2213	692	Gene3D	Phosphorylase Kinase; domain 1	307	422	-	-
	Ahy9g2213	692	ProSiteProfiles	Gnk2-homologous domain profile.	34	142	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g2213	Ahy-Chr9	111102463	111105809	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g2213	4	692	Receptor kinase-like Gene Family	AT4G05200	48.575	0.0	643

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Ahy9g2213		PK_Tyr_Ser-Thr	7.50E-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g2213	-		-	cit:102622618	719.924