Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2185 ATGGAACCGGGCATGAGATCCGATGGCCCTTCTGGGGCTTTGGTGAAGAACAGGAGATCTTCAGGGTGTTTGGTTGTTAGGAAGAAAGGTGATGGATTGAGTGGTGGGGTTGGTAGTTCTTTCAGCTCCAGGAAGCTGAATGCATCAAAGAAAGGGAAGAAGAGGCCCAAGGTTGAGTTAAGTAGTAGCGATTCGGAATCGAGTCAGGAGCTATTGATGCCATCTTCTAGAGGGCTTGGTCCTGAGACCATTCGAGTATGCAATGGTTTGACAGCTGTTAAGCGGGACGAGGCTGGTGATGGTGGAACTGGAAGGAAGCGGGAGAGGTTTGAGGACATTAGTCATAACGGTGATGAGATGGGGGAGGGAAATGGTTCAGAGAGGAGGGAAAAGAAACTTAGCAAGATTGATGTGTTTGATTTCGACGAATACGATGCTATGGATGCAGACATGATGAGAAGGAGCCATGTAGATAGCAATGGGGGCGGCTTTGGAGGGGAAAGGCTTGGGGGAGCAATGCATGCTGCTAGAGGTGGCACTGATAGGGAATTCAAAACTGGTTCAAGCAGACACACCCTTAATAAGAGAAAGAACTCCCATTGTGATAAGGCAAGTCACTTGCACCCAAGAGATAGTAAATTAAAGAAGTGGGATGCAGCTCAGCATCCTCAGCCCGTGCCGAAGGAGAAGTTTAATTCTGATGAATCCATTAGGGTTCAAGGGAAAAATGGTGTTTTAAAGGTGATGGTTAATAAGAAGATGTGTAAGCCATCAAAGCACGTTGATAATCGCAAACATGTAGAAGGGCAACGAAGTTTGAGGGCTGAGGGCATTGCCAAGAAGAATGTTCTGATCCATCCTTCATCTTGCTTGGAAAAAAAACCTGTTAAGAAACAAGGTTTACATGCTAGGACAGAGAAGAAATTGGTAGCAAGAAGAAAATCTTTGTCAAGTAACGACACTAAGGGTGATGACCAGGATTCAGATAACAGTGGCACATCATTGAATGTGGGAGTGAAGTGCATTAAAGCTTTCAAGTCTTTAAAGAGGGGGACCTCGGACGATGAACAGACTCCTAAGCATGAAAAGACCCCAACCACAGCAGGAACTAAAAAGGAGAAAATAAGGCGTGGTAGTGGCACAGAAAAGCAGAAGCTACGAGAACAGATACGGGAGATGCTTCTTAATGCAGGTTGGACCATAGACTATCGCCCTCGGAGGAAGAGAGACTATCTTGATGCAGTTTACATTAATCCTGGGGGTACAGCCTATTGGTCCATCATCAAGGCCTATGAGGCGTTTCAGAAGCAATTGAGTGCTGACGACCCTGGGGCCAAGCCCAATGGGGAGTGCTCTTCTTTTGCTCGTATCACAGATGATGTGCTTAGTCAGTTAACAAGGAATACTCAGAAGAAGATGGAGAGAGAATTAAAGAAGAAGAAGAAGAAGAAACAGAAGAAGGAAAGAGATGATAGTGAGAGTGATAGTGGAAAAGAACCTCGCATTAAGAGATCTTTAAGCAACAAGCGTGATATGAATGGCATGGAAAGTGATAGTGATGAAGAGAAATTAAGCTCCTTTTTAAAGCGGGAGCGTAAGTCAATGAAAAATAAAATGATTGAAAATACTGTTAACAGTTGTAGATCTACAAGCAAGAAAGCTGACCTTCACACAGATGAAGGAACTGAAAAATCACTTTTAGGAAATGATCCTCATCAACTACATGGGAGGAAAAGTAAGAAACATGGAAGGTGCACTTTATTGGTTCGTAATTCCAACATAGGGTCAAATTCAGATTCTGATGACTATGTTCCATATATGGGCAAACGAACGGTGCTTTCCTGGTTGGTTGACTCTGGAGCTGTACAGTTAAGCCAAAAGGTTCAGTATCGTAGAAGGAAACGTGTAATGCAGGAGGGATGGGTCACCAGGGATGGGATTCATTGTAGTTGCTGTAGTAAAATACTCACTGTTTCCAAGTTTGGGCTTCATGCAGGAAGTAAATTGCGCCAGCCATATCAAAACATATATTTGGATTCTGGAGATTCTCTTCTACAGTGCCAGATAGATGCATGGAATAAACAAGAGAATTCTGAGAAAATTGCTTTCCATGCAGTAGATATTGATGGTAATGATCCAAATGATGATACTTGTGGTATATGTGGAGATGGAGGGGATTTGATCTGTTGTGATGGTTGTCCATCAACGTTTCATCTGAGTTGCTTGAATATACAGATGCTCCCCCCTGGTGAATGGCATTGTCCAAATTGCACATGCAAATTTTGTGGAGTAGTCCGTGGTCCTGTAAACAAAGAAGATGAATCAACTTTAAATGCCCTACATAGATGCAACTTATGCGATAAAAAATTTCATGAATGTTGTGCTAAGGAGATGAAAACCCTTCCTACTAACTCCGATATGTCAAGCCCTTCCTTTTGCGGAAGGGACTGCAAAGAGCTTTCTGAGCACTTGAAGAAATACCTTGGTACTAGGCATGAAATAGATGGAGGCTTCACATGGTCTCTCATTCATAGAACAGAAGACGACTCAGAGGCATCTAGTAGGGGAATTATGCAGAGGGTTGAATGGAACTCCAAGTTAGCTGTTGCACTGACTGTGATGAATGAATGCTTTTTGCCAGTTATTGATAGGAGAAGTGGGGTCAATTTAATACATAATGTTTTATATAATAGTGGGTCAAACTTCAGCCGGTTGAATTACACTGGCTTTTATACTGCGATTTTGGAGCAAGGCGATGAAATAATTTCTGCAGCTTCTATCAGGTTCCATGGGACCAAGTTAGCAGAGATGCCATTCATTGGAACTCGCCATATGTATAGGCATCAGGGGATGTTGCGCAGGCTTTTTTCTGCCATTGAATTGGCCCTTTGCTCTCTGAAGGTTGAGAAATTGGTTATTCCAGCAATCTCTGAACTGATTCATACATGGACAACAGTTTTTGGCTTCATGCATCTTGAGGAATCACTCAGACAGGAAATGAGGTCATTGAATATGTTGGTCTTCCCCGGTATAGATATGTTGGAGAAAGTGCTAACCAAACAAGGAAAACTTGATGGTGTTGAGAAAATGGAAACTAGAGATGAATTTGTTACTATGCCTAATATGGCTGGTAAGTTGGATATGAATTCCTCAGCTCTGGAAGATCCTGAACGGAGTGATCATGCTAATTCAAATCCTGACAATGAGATAAACGACGACTCTAGTGATGCTTCTCAAGAACAGGATAATCACATTTTGGTTGACAGCACCAAGTCTCATTCTGCAGATAGATCATCTGATTTTGTTTCAAATAAATGTGTTTCTCCTTCTAGTACCAGGGATGATGTGCTAGAAACAAACAATAAAGCAGTGACAGCTTTTCCTGGTAATAATAAATTGCATCCCTCTGTGAAATGTCAAAATCACACTTCTTTGAGCAGTCCTCCATTAGTTTCTCCATCTCCAGATTGCCATGAACTTACTGCTTTGCATTCGGTGAGTGTATGTTCGGACCCTGATTCTGCGAAAAATCTGGCACAACCTGTTTCTGATGGGAAATGTCACATGCACACTGATGACGTTAATCCAGGGTTGGATTCTCAAGTGGGAGATAATGCTTTGTTTTCTAAAGAGGTTGATATGAATGATGCCCGTGATGAGGTTCTTGAATCAGTGAATTTATCTCAGGGTAAAATTACGAAGGAGAAAAATGAAGTTGTGGATGTCTCTGGTTCTGTTCCCAATCATGCTGATGAGAGTTCTTTGCAAGTGAAATCTGATTTGATGGATGAAATTGTATTGGAGGGAGAAAAGAATTTGGACAAAGAGGTTGCATCACGTGAAATGTGTGTGGATGAAACTGGCCTTAGGGCATCTGGTGCTAGTTCTTAA 3891 0.4228 MEPGMRSDGPSGALVKNRRSSGCLVVRKKGDGLSGGVGSSFSSRKLNASKKGKKRPKVELSSSDSESSQELLMPSSRGLGPETIRVCNGLTAVKRDEAGDGGTGRKRERFEDISHNGDEMGEGNGSERREKKLSKIDVFDFDEYDAMDADMMRRSHVDSNGGGFGGERLGGAMHAARGGTDREFKTGSSRHTLNKRKNSHCDKASHLHPRDSKLKKWDAAQHPQPVPKEKFNSDESIRVQGKNGVLKVMVNKKMCKPSKHVDNRKHVEGQRSLRAEGIAKKNVLIHPSSCLEKKPVKKQGLHARTEKKLVARRKSLSSNDTKGDDQDSDNSGTSLNVGVKCIKAFKSLKRGTSDDEQTPKHEKTPTTAGTKKEKIRRGSGTEKQKLREQIREMLLNAGWTIDYRPRRKRDYLDAVYINPGGTAYWSIIKAYEAFQKQLSADDPGAKPNGECSSFARITDDVLSQLTRNTQKKMERELKKKKKKKQKKERDDSESDSGKEPRIKRSLSNKRDMNGMESDSDEEKLSSFLKRERKSMKNKMIENTVNSCRSTSKKADLHTDEGTEKSLLGNDPHQLHGRKSKKHGRCTLLVRNSNIGSNSDSDDYVPYMGKRTVLSWLVDSGAVQLSQKVQYRRRKRVMQEGWVTRDGIHCSCCSKILTVSKFGLHAGSKLRQPYQNIYLDSGDSLLQCQIDAWNKQENSEKIAFHAVDIDGNDPNDDTCGICGDGGDLICCDGCPSTFHLSCLNIQMLPPGEWHCPNCTCKFCGVVRGPVNKEDESTLNALHRCNLCDKKFHECCAKEMKTLPTNSDMSSPSFCGRDCKELSEHLKKYLGTRHEIDGGFTWSLIHRTEDDSEASSRGIMQRVEWNSKLAVALTVMNECFLPVIDRRSGVNLIHNVLYNSGSNFSRLNYTGFYTAILEQGDEIISAASIRFHGTKLAEMPFIGTRHMYRHQGMLRRLFSAIELALCSLKVEKLVIPAISELIHTWTTVFGFMHLEESLRQEMRSLNMLVFPGIDMLEKVLTKQGKLDGVEKMETRDEFVTMPNMAGKLDMNSSALEDPERSDHANSNPDNEINDDSSDASQEQDNHILVDSTKSHSADRSSDFVSNKCVSPSSTRDDVLETNNKAVTAFPGNNKLHPSVKCQNHTSLSSPPLVSPSPDCHELTALHSVSVCSDPDSAKNLAQPVSDGKCHMHTDDVNPGLDSQVGDNALFSKEVDMNDARDEVLESVNLSQGKITKEKNEVVDVSGSVPNHADESSLQVKSDLMDEIVLEGEKNLDKEVASREMCVDETGLRASGASS* 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2185 1296 ProSitePatterns Zinc finger PHD-type signature. 718 757 IPR019786 -
Ahy9g2185 1296 PANTHER PHD FINGER FAMILY PROTEIN 1 1194 - -
Ahy9g2185 1296 CDD PHD2_CHD_II 718 757 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 98 133 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 465 525 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 291 327 - -
Ahy9g2185 1296 ProSiteProfiles Zinc finger PHD-type profile. 715 760 IPR019787 -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 1040 1114 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 546 580 - -
Ahy9g2185 1296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 707 834 IPR013083 -
Ahy9g2185 1296 Pfam Tify domain binding domain 640 690 IPR032308 -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 1051 1067 - -
Ahy9g2185 1296 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 1194 - -
Ahy9g2185 1296 Pfam PHD-finger 718 760 IPR019787 -
Ahy9g2185 1296 SMART PHD_3 717 758 IPR001965 -
Ahy9g2185 1296 SMART PHD_3 759 818 IPR001965 -
Ahy9g2185 1296 SUPERFAMILY FYVE/PHD zinc finger 707 766 IPR011011 -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 349 383 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 1096 1114 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 158 232 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 1 133 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 486 525 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 289 333 - -
Ahy9g2185 1296 Coils Coil 470 490 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 198 218 - -
Ahy9g2185 1296 MobiDBLite consensus disorder prediction 552 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2185 Ahy-Chr9 110758744 110765478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2185 1 1018 PHD Transcription Factor Family AT4G14920 47.257 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy9g2185 TDBD 1.70E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2185 - - adu:107466994 1873.98