Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2158 ATGGCTGGTAGGCTACCTGGTGTTGGAGTGCCCCCTAGAAAGAGATCTTCTTCTTCTTCTTCATCATCATCTTGTTCTTCTTTGTTAGAGCACAACCACTACAATCTTGCCACCTACCGAAGAGTATCATTAGTGGAGACAAGTGCCTTGGATGAAACTGCTCTTAAGGCCAGACAAAGACTTCAGAAGAAGCTTGCACAATTTTTTCCTTCTTCCAGGGAAAATGAGAATCCAATAAGAGAAGGAAAAGTGAAGAAAGAAAAGAGAGATGAAGGAATAATAATAGGAAGGAAGCTATTATCAAATGCATGGTTAATGCGTGCTAAGAAGAACGAGAGAAAAGTGTGTGCAGTGTGCCTAGAAGATTTCCAGCAAGAGAAGCAGATTATGAACCTTTCTTGCTCTCACAAGTTTCACTCTGCATGCCTTCTCCCATGGCTTCAATCCCATCCTCACTGTCCTTATTGTCGAACCCCAGTTGATGCACACACATATACTCCTTAA 504 0.4206 MAGRLPGVGVPPRKRSSSSSSSSSCSSLLEHNHYNLATYRRVSLVETSALDETALKARQRLQKKLAQFFPSSRENENPIREGKVKKEKRDEGIIIGRKLLSNAWLMRAKKNERKVCAVCLEDFQQEKQIMNLSCSHKFHSACLLPWLQSHPHCPYCRTPVDAHTYTP* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2158 167 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 17 159 - -
Ahy9g2158 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 165 IPR013083 -
Ahy9g2158 167 ProSiteProfiles Zinc finger RING-type profile. 116 157 IPR001841 -
Ahy9g2158 167 MobiDBLite consensus disorder prediction 13 27 - -
Ahy9g2158 167 Pfam Ring finger domain 115 157 IPR001841 -
Ahy9g2158 167 MobiDBLite consensus disorder prediction 1 27 - -
Ahy9g2158 167 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 17 159 - -
Ahy9g2158 167 SMART ring_2 116 156 IPR001841 -
Ahy9g2158 167 CDD RING-H2_PA-TM-RING 115 157 - -
Ahy9g2158 167 SUPERFAMILY RING/U-box 115 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2158 Ahy-Chr9 110508392 110510944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2158 108 157 C3H Transcription Factor Family AT3G58720 42.000 1.25e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2158 - - lja:Lj1g3v0112670.1 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3476 19 157485574 157487689 Ahy9g2158 9 110508392 110510944 hybridization