Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2154 ATGAACGGCGCAGGGCCCACAGCCACAGCCACCGCCACTGCCACCGCCACCTTCAGGTCTATCCTCGACAAGCCCCTTCACCAGCTCACCGAAGATGACATTTCCCAACTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCAATTCAGCAGGTCATTTCCCTGAAGGCGCTGCTCGAGCCCTCCAACGACGACGCCCCCGCCGTCGTTCCCACCCTCCATTCTACCTCTCCACCTCGGCCTCCGCCTCAGCCTCAAGGGGATTTGAACGATGCTCCGCCCGCTGAAGATCCGGCTCTTCATGCTGCCGATGACATTCAGAAATCTGCGTCGTCTCCCGAAAAACCCACTGAAACCAATGACACCAACGTTGTCAGCCCCAGAGCATGTGCAACTAGCGGAGTTGGGCAAATGACGATATTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACAGGCTATCATGCAACTTGCAGCAAGTCCAGTCCAATTTGCTCAGGAGGATCCTGTAAACAGAAATACAACAGTCTGGGTTTCTCCTTGTCACATACCATTGGATAAGGATGTCCCAGTTCCTGTTGATACAACAATGGTGCAGGTTGCTCAAGCAGATAAGATGATGGAATATCCTCTGCATTACAGGGAGAAGGGAATCATAGCTCGTGATGCTGATGGTCAGGCAAGCAGACAAGTTTCATTGCAACGATATCGTGAAAAGCGAAAAGACAGGGGAAGATTGAAGGGCAAGAAATTGCCTGGGGTAACGTCATCTAACTTGGAGATGTATTTGCTTCCACCGAAAATCCAGACCTCAAATGGCAATTCAAGCCGAAGTAGCACATGCTCCCCACCACAGCCTAGACCGCCTCTTGCTTTCAGTGGCTCGGCTGACAACCCGCTAAAAGTTGGCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1008 0.5129 MNGAGPTATATATATATFRSILDKPLHQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSNDDAPAVVPTLHSTSPPRPPPQPQGDLNDAPPAEDPALHAADDIQKSASSPEKPTETNDTNVVSPRACATSGVGQMTIFYCGKVNVYDGVSPDKAQAIMQLAASPVQFAQEDPVNRNTTVWVSPCHIPLDKDVPVPVDTTMVQVAQADKMMEYPLHYREKGIIARDADGQASRQVSLQRYREKRKDRGRLKGKKLPGVTSSNLEMYLLPPKIQTSNGNSSRSSTCSPPQPRPPLAFSGSADNPLKVGLPIDLNDKDVQEC* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2154 335 MobiDBLite consensus disorder prediction 76 140 - -
Ahy9g2154 335 Pfam tify domain 149 178 IPR010399 -
Ahy9g2154 335 MobiDBLite consensus disorder prediction 283 300 - -
Ahy9g2154 335 SMART tify_2 144 179 IPR010399 -
Ahy9g2154 335 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 15 309 - -
Ahy9g2154 335 Pfam Jas motif 245 262 IPR018467 -
Ahy9g2154 335 ProSiteProfiles Tify domain profile. 144 179 IPR010399 -
Ahy9g2154 335 MobiDBLite consensus disorder prediction 283 335 - -
Ahy9g2154 335 MobiDBLite consensus disorder prediction 123 140 - -
Ahy9g2154 335 MobiDBLite consensus disorder prediction 87 102 - -
Ahy9g2154 335 MobiDBLite consensus disorder prediction 244 271 - -
Ahy9g2154 335 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 309 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2154 Ahy-Chr9 110463212 110467587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2154 13 282 Tify Gene Family AT4G14720 45.704 1.72e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy9g2154 tify 1.30E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2154 - - adu:107467071 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3479 19 157538581 157543407 Ahy9g2154 9 110463212 110467587 hybridization