LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g2142	ATGCAGCTCCTCAACTCCGATGAACCCGCCTCCGAAACCCGCAGCCATCCCGAGAAACCCCAAGAAGAATCCAGTTCCCCCGCGACCGATTCATCGGACTCTACAACCGACGAAGGCGTGGCCCTCGACGTTTCCGGGAAGAGCCTGGAGTTTTCGGCGGTGGATGAGGAGACCGCGGAGGACTCCGCTGCGGAGAGCTTGTACCTCTACAGGAACGTTTACAGCTTGGTTCCGAAGTGGGTGGGTGGTCTGGCACGGTTGAAGACGCTGAAGTTCTTTGGGAACGAGGTGAACTTGTTCGCTCCGGAGTTCAGGGGCATGACGGCACTGGAGTGCTTGCAAATGAAGATTTCATCGCCTGGGATCGGTGGGTTGCCGCTTCACAAGCTGAATGGGTTGAAGGAGCTCGAGCTCTCCAGAGGGCCACCAAGGCCTTCGGCTTTTCCATTGTTGGCCGAGATTGCTGCCCTTAAGCGATTGACTAAGCTTTCTATTTGTCATTTTTCTATCAGATATCTACCTCCGGAAATTGGATGCTTAAAGAATCTGGAGTATCTTGACCTTTCATTCAATAAATTGAAGACATTGCCGTCAGAGATCAGTTGCTTGAATAGCTTAATAACCATGAAAGTTGCGAATAATAAGCTAGTGGAGCTACCGTCCACAATGACCTCTCTTACAAGGTTGGAGAGTTTGGACCTTTCAAATAATAGGTTGACTTCGTTAGGCTCTATTGAACTTGGTTCCATGTGTAGGCTTCAGCTCTTAAATCTTCAGTACAACAAGCTGCTCAGCGTTTTTCACATTCCTTCATGGATATGCTGTAAACTGGAAGGAAATGATGGAGGTGGGTGTAACGATGATTGTAGCAGTTCTTCTGTTGAAATGGATGTCTACGAAAGCAGTCAACAGGAAAATGATCGAACAATTTCTAATGGTGCGCATAATACCTCATCAAGCACATTAACTAGTACCTCATCTAGCAGTAGATGTTTCTCAGCCCGAAAGTCAGGTAAAAGGTGGAAGCGGCGGTTTTATTTACAGCAAAAAGCTCGTCAAGAGCGCCTGAATAACAGCAGGAAGTGGAAAGTTGTAGATCAAGATCAATTATTGAGCAATAATATTCAAATAATTTCTGAGTCTGGAAACATTGCTGCTGCAAGTTGCAAAGAAACTGTATCAGACCATGTGAATCTGGATGATAATGGGAAAAAAATATTCTCTGAAAAAGAAGTAAATGATAATTTAAGTGGTAATAATAAGGATGAAGTAATATTAGAAAAGCAATTTTCTAGTGACAATTGCCATACTGCTGAATGTAAAGATGAAAGAGATGCATCCTTAAATGGACCTGGTGAACAGGATGAACAATCTTTGGAGATTTTGAAGTGTTTTTCTACAAAGAGGTATTCAGATCGGCATCTTGACAATCCTAAACCATGCAAGTTTAGAAAACCAATTGTTGATGCCTCAATATTGGCTTGCAAGTACAGTAAGTTCTCAATTTGTGGTATTGAAGACCATCTGTCAGATGGGTTTTATGATGCAGGACGTGATCGGCCATTTATGCCTCTTGAGAGTTATGAGCAGAATCAGTGCCTTGATTCTCGTGAGGTCATCCTACTAGACAGGAAAAGGGACGAAGAGTTGGATGCTGTATTGCCCTCTGCTCAGGCACTGGTCACAAATTTGAAAAAGTTAAATGGTTTAAATACACGTGGGATGCATGCCGTAGTTGATAGCTTGCAGACAGCTTCACTGCTTGCACTCTTTGTATCGGACCATTTTGGTGGCAGCGATAGAAGTGCTATGGTAGAAAGAACACGGAAATCTGTGTCAGGTTCAAACTATAATAAGCCTTTTGTTTGTACGTGCTCAGCTGGAAGCAGCACCAGTATGACTTCTTCTAAAAAACCTGCTGTAAACACCATAGAAGATATCACTCTTTCTAGAATCTCTGAACAATGTATCGATTCTATTAAAAAAAGGCGAAGTTCAATCATAGTCCCTATTGGTTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGTGATCATATGGTGCCAGCAGTGCCTTGTGAGCTTGTCAGGGGTTACTTGGACTTTTCCCCACATGCATGGAATATCATTCTGATTAAGAGGGGTGATACATGGGTCCGAATGCTGGTTGATGCTTGTCGACCCCATGACATAAGAGAAGAGAAGGATCCTGAATACTTCTGCAGGTACGTACCTCTTAGTCGAGCCACGATCCCCCTTTCTTCTCGTGGAAGTCATGGTCCTGATTGTTTGTTTCCATCTCTCTCTACTTGTGACGAACTTAAGAAAAAAGCTTCCACTACTTTAGTGCAGTGCAAAATTGGGTCAGTTGAGGCTGCAGCAAAGGTACGTACTTTGGACGTGCAGGGAAGTTCAGCAGCCGAAATTAGAAATTTTGATTATAATTGTTTGGGAGAAGTTAGAATTCTAGGTTCGTTAAAACATCCCTGCATAGTGGAAATGTATGGACACGAAATATCGTGCCAATGGACTTTCACAGCTGATGGCAAGCCTCACAATCGCATATTAAGATCTGCAATTTTTATGGAGTATGTTGATGGCGGCTCCTTGAAAAACTATTTGGAAAAGCTATCAGAAGCTGGTGAAAAGCATGTCCCTATGGAGTTGGCGTTGTATATCGCCAGAGATGTCTCCTCTGCCTTGTCAGAGCTGCACTCAAAGCACATAATTCATCGGGACATTAAAAGTGAAAACATCCTGTTTGATTTGGATAGAAAGACTGATGATGGAACTCCCACTGTGAAGTTGTGTGATTTTGACAGTGCAGTGCCACTAAGATCACGTATGCATGCTTGCTGTATTGCACATATGGGAACTCCACCTCCTTCTGTATGTGTTGGAACACCACGGTGGATGGCTCCAGAAGTTATGCGGACTATGTATGAAAAACGCGCTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTTTTGGAGATACTGACTCTGCAAATTCCATATTATGGAGTACCTGATTCAGACATCCATGACAGTCTGCAGATGGGTAAGCGGCCACGATTAATAGATGAACTGGAGGCATTGAGTTCAATGAGTGAACCCTCAGTAATTCAATCTGGCGAAGACCTGGAAAAATCAGATGCAGAGGCAGACTTGCTGAAATTCCTTGTTGGGTTGTTTCATAGATGCATGGAAGAAAATCCTGCAGAGCGTCCTACAGCTAAAGAAATCCATGAAATGCTACTTGCACGCACAGGCCGTTTACAAGCACAAGATGATAGGAAGATTTAG	3333	0.4338	MQLLNSDEPASETRSHPEKPQEESSSPATDSSDSTTDEGVALDVSGKSLEFSAVDEETAEDSAAESLYLYRNVYSLVPKWVGGLARLKTLKFFGNEVNLFAPEFRGMTALECLQMKISSPGIGGLPLHKLNGLKELELSRGPPRPSAFPLLAEIAALKRLTKLSICHFSIRYLPPEIGCLKNLEYLDLSFNKLKTLPSEISCLNSLITMKVANNKLVELPSTMTSLTRLESLDLSNNRLTSLGSIELGSMCRLQLLNLQYNKLLSVFHIPSWICCKLEGNDGGGCNDDCSSSSVEMDVYESSQQENDRTISNGAHNTSSSTLTSTSSSSRCFSARKSGKRWKRRFYLQQKARQERLNNSRKWKVVDQDQLLSNNIQIISESGNIAAASCKETVSDHVNLDDNGKKIFSEKEVNDNLSGNNKDEVILEKQFSSDNCHTAECKDERDASLNGPGEQDEQSLEILKCFSTKRYSDRHLDNPKPCKFRKPIVDASILACKYSKFSICGIEDHLSDGFYDAGRDRPFMPLESYEQNQCLDSREVILLDRKRDEELDAVLPSAQALVTNLKKLNGLNTRGMHAVVDSLQTASLLALFVSDHFGGSDRSAMVERTRKSVSGSNYNKPFVCTCSAGSSTSMTSSKKPAVNTIEDITLSRISEQCIDSIKKRRSSIIVPIGSVQYGVCRHRALLLKYLCDHMVPAVPCELVRGYLDFSPHAWNIILIKRGDTWVRMLVDACRPHDIREEKDPEYFCRYVPLSRATIPLSSRGSHGPDCLFPSLSTCDELKKKASTTLVQCKIGSVEAAAKVRTLDVQGSSAAEIRNFDYNCLGEVRILGSLKHPCIVEMYGHEISCQWTFTADGKPHNRILRSAIFMEYVDGGSLKNYLEKLSEAGEKHVPMELALYIARDVSSALSELHSKHIIHRDIKSENILFDLDRKTDDGTPTVKLCDFDSAVPLRSRMHACCIAHMGTPPPSVCVGTPRWMAPEVMRTMYEKRAYGLEADIWSFGCLLLEILTLQIPYYGVPDSDIHDSLQMGKRPRLIDELEALSSMSEPSVIQSGEDLEKSDAEADLLKFLVGLFHRCMEENPAERPTAKEIHEMLLARTGRLQAQDDRKI*	1111

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy9g2142	1110	ProSiteProfiles	Leucine-rich repeat profile.	182	203	IPR001611	GO:0005515
	Ahy9g2142	1110	PANTHER	BNAC08G43810D PROTEIN	65	1099	-	-
	Ahy9g2142	1110	ProSiteProfiles	Leucine-rich repeat profile.	228	249	IPR001611	GO:0005515
	Ahy9g2142	1110	SMART	serkin_6	778	1097	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2142	1110	Pfam	Protein kinase domain	819	1093	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2142	1110	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	915	927	IPR008271	GO:0004672\|GO:0006468
	Ahy9g2142	1110	MobiDBLite	consensus disorder prediction	296	334	-	-
	Ahy9g2142	1110	Pfam	Ethylene-responsive protein kinase Le-CTR1	648	730	-	-
	Ahy9g2142	1110	PRINTS	Leucine-rich repeat signature	183	196	-	-
	Ahy9g2142	1110	PRINTS	Leucine-rich repeat signature	226	239	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g2142	Ahy-Chr9	110343995	110350085	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g2142	825	1098	MAP Kinase Kinase Kinase	AT1G63700	29.964	3.78e-23	104

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-2	Ahy9g2142		Pkinase	4.20E-38	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g2142	-		-	gmx:100811118	1617.05

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy19g3493	19	157622524	157627351	Ahy9g2142	9	110343995	110350085	hybridization

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