Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2141 ATGCCAGTGAGGCAGATGAAAGAAAGCTCTGAGCAACACATTGTGATTAAACCCCATTCTCAGAACCACATGAATAAGGCACCAAAAGCTGCACAAAATGGAAAAGGACCACCACCACCACCACCATCACAAGAGAACCACCAGCACCACAACAACAACCACCACCACCACCACAACCACCAGTCATCACCTCAACCAAGAAACAAAGGGAGAAGAAGGGGCAGAGGTGGGAGAAAATCTGATCAAGGAGAGATTTTGATGAGACCAAGTTGCAGGCCCTGCACTGCTGGTGCTGCTCCTCCTCCTGTGACAGCAAATGGGATTAATAGTAATAATGTTGAGAATGGCTGCAAGATCAGTGGTGGTGGTGGTGACATAACAGACATGGGTTTTCCCACTTCAAGCAAATCCTTGAGCTTTGCTCGCAGGCCTGGCTATGGACAAGTTGGGACAAAATGCATTGTCAAGGCTAATCACTTCTTTGCTGAGCTACCGGACAAGGACTTGAACCAATATGATGTAACAATTAGCCCAGAAGTGAGTTCAAGAGCAGTAAATCGGTCCATAATAGCAGAACTTGTGAGGCTTTACAAAGAGTCTGATTTGGGGATGAGGCTTCCTGCTTATGATGGCAGGAAAAGTCTGTACACTGCTGGCCAGCTTCCCTTTGCCTGGAGAGAATTTAAGATAAAGCTTCTTGATGATAATGATGATGGAGTTAATGGCCCCAAAAGGGAAAGGGAATATAGGGTGGTGATCAAGTTTGTTGCTCGTGCAAACTTGCATCACTTGGGCCAGTTTCTAGCCGGCAAGCGAGCTGATGCACCACAGGAGGCACTTCAGATTCTTGATATTGTACTGAGAGAGCTATCAACTAAGAGGTACTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCTCAACGGCTTGGAGAGGGGTTGGAATCATGGTGTGGATTCTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGACATGGCTTCTGCTGCATTCATTGAGCCTCTTCCAGTAGTAGAATTTGTTGGCCAACTATTAGGGAAAGATGTTCTTTCAAGGCCACTGTCGGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTAAAGGTTGAAGTAACACACAGAGGAAGTGTAAGAAGGAAATATCGCGTTTCAGGATTGACTTCTCAACCAACAAGAGAACTTGTGTTCCCTGTTGATGAGAACTCAACTATGAAGTCAGTGGTTGAATACTTTCAAGAGATGTATGGTTTCACTATTCAATACACTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAGGCAAACTACTTACCCATGGAGGCCTGTAAAATTGTGGAAGGGCAAAGGTATACAAAAAGATTGAATGAGAAGCAAATTACTGCACTGCTCAAAGTTACTTGCCAGAGACCGCGCGATCGCGAAAATGACATCTTAAGGACGGTGCAACATAATTCTTATAATGAAGATCCTTATGCAAAGGAATTTGGTCTTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCTTGGCTTAAATACCATGAAAGTGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGTCAGTGGAACATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCGTGCATTAACTTTTCGCGGAGCGTGCAAGATAGTGTTGCTCGCACATTTTGTCATGAGCTTGCTCAAATGTGTCAAGTGTCTGGCATGGAATTCAATCCAGAGCCTGTCATTCCCATCTACAATGCCAAGCCAGAGCAGGTAGAGAAAGCTTTAAAGCATGTTTATCATGTGTCGACGAACAAAACTAAAGGGAAAGAGTTGGAGCTTTTGTTAGCAATATTGCCTGACAACAATGGATCTCTATATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAACATGTCTTCAAGATCACCAAACAGTACTTGGCAAATGTATCTCTAAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTAGATGCTGTAAGCTGCAGAATACCGTTGGTTAGTGACATACCAACCATAATATTCGGAGCAGATGTTACTCACCCTGAAAATGGAGAAGACTCTAGCCCTTCAATAGCTGCTGTAGTAGCATCCCAGGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGACAGGAGCTTATACAAGATTTGTACAAAACTTGGCACGATCCTGTTCGTGGCACAGTCAGCGGTGGCATGATCCGAGATTTGTTGGTTTCTTTTAGAAAGGCAACAGGGCAAAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTCTCCTTTATGAATTAGATGCAATCCGGAAGGCCTGTGCTTCCTTAGAACCAAACTATCAGCCTCCGGTAACTTTCATAGTTGTACAAAAACGACATCATACACGGTTATTCGCTAACAACCACCGGGACAGGAGCAGTACAGATAAGAGTGGGAATATAATGCCTGGGACTGTTGTTGATTCTAAAATATGTCATCCAACAGAATTTGATTTCTATCTATGCAGTCATGCTGGCATCCAGGGTACAAGTAGGCCTGCCCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAATCTTTGACAAACAATCTGTGTTACACATATGCTAGGTGTACTCGATCTGTATCAGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCATTTAGAGCACGTTTCTATATGGAGCCAGATATGCAAGAGAATGACTCTACAGGTGGTGGTAACGGTGGTGGTCGTGGAGGATCGAAGGGAACTCGAGCAGCCGGAGAGTGTGGTGTGAAGCCACTGCCAGCCTTGAAAGAGAATGTGAAGAGAGTAATGTTTTACTGTTGA 3021 0.4366 MPVRQMKESSEQHIVIKPHSQNHMNKAPKAAQNGKGPPPPPPSQENHQHHNNNHHHHHNHQSSPQPRNKGRRRGRGGRKSDQGEILMRPSCRPCTAGAAPPPVTANGINSNNVENGCKISGGGGDITDMGFPTSSKSLSFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTISPEVSSRAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLLDDNDDGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQHNSYNEDPYAKEFGLKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCHELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNIMPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENDSTGGGNGGGRGGSKGTRAAGECGVKPLPALKENVKRVMFYC* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2141 1006 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 68 1005 - -
Ahy9g2141 1006 SMART Piwi_a_2 637 958 IPR003165 GO:0003676
Ahy9g2141 1006 MobiDBLite consensus disorder prediction 962 983 - -
Ahy9g2141 1006 ProSiteProfiles PAZ domain profile. 349 463 IPR003100 GO:0005515
Ahy9g2141 1006 SUPERFAMILY PAZ domain 343 504 IPR036085 GO:0005515
Ahy9g2141 1006 SMART PAZ_2_a_3 353 485 IPR003100 GO:0005515
Ahy9g2141 1006 SUPERFAMILY Ribonuclease H-like 629 959 IPR012337 -
Ahy9g2141 1006 Pfam Mid domain of argonaute 546 623 IPR032473 -
Ahy9g2141 1006 Gene3D - 527 700 - -
Ahy9g2141 1006 SMART DUF1785_2 296 348 IPR014811 -
Ahy9g2141 1006 MobiDBLite consensus disorder prediction 50 76 - -
Ahy9g2141 1006 Gene3D - 706 1006 IPR036397 GO:0003676
Ahy9g2141 1006 PANTHER PROTEIN ARGONAUTE 10 68 1005 - -
Ahy9g2141 1006 CDD Piwi_ago-like 507 957 IPR045246 -
Ahy9g2141 1006 Pfam Piwi domain 638 957 IPR003165 GO:0003676
Ahy9g2141 1006 CDD PAZ_argonaute_like 348 462 - -
Ahy9g2141 1006 Pfam N-terminal domain of argonaute 152 287 IPR032474 -
Ahy9g2141 1006 Pfam Argonaute linker 1 domain 297 346 IPR014811 -
Ahy9g2141 1006 ProSiteProfiles Piwi domain profile. 637 958 IPR003165 GO:0003676
Ahy9g2141 1006 Gene3D paz domain 342 467 - -
Ahy9g2141 1006 Pfam Argonaute linker 2 domain 489 535 IPR032472 -
Ahy9g2141 1006 MobiDBLite consensus disorder prediction 1 98 - -
Ahy9g2141 1006 Pfam PAZ domain 375 479 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2141 Ahy-Chr9 110324064 110331285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2141 1 1006 Eukaryotic Initiation Factors Gene Family AT5G43810 80.572 0.0 1651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2141 K11593 - gmx:100816999 1778.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3494 19 157642909 157649954 Ahy9g2141 9 110324064 110331285 hybridization