Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2129 ATGCCATCACGCCACCCGTCCACGTCATCGCCACCAAACAAACCCCAAAACCATTTCTTCTCCTCCGCCTCCTCTTTCTTCGTCTTCTTCTTCCTCTGCCTTCGAAACCCAACAAGGAAGAAGAACCGGACAACTCCTTCTTCTGACTCCGACTCCAACCCTCCTCACCGCTTCTCCTACTCCCTCCTCCGCCGCGCCACCAACTCCTTCTCCACCATCCTCGGCCATGGAGGCTTTGGCCCTGTCTTCTCCGCCTCCCTCGCCGGAAAACCCCTCGCCGTTAAGCTCATGGACTCCTCTGCATCCCTCCAAGGGGAGCGCGAGTTCCACAACGAGCTCCTCTTCGCTTCCAGGCTCCTCCGTTCATCCTCCTCCTCCACGTGCCGTCATGTGGTCCCTGCTATAGGGTTCGCCTCCGACCCCAAACGGCGCCGTTTCCTCATCGTGTACGATCTCATGCACAACGGCAACCTCCACGACGCACTCCTCCGCCGAAAATCCCCTGAGCTCATGCGATGGCAGACGAGATTCTCCGTTGCACTGGACGTCGCGAGAGGGTTACAGTTTCTTCACTCCTGCGACCCTCCGGTGATTCACGGCGATATCAAGCCCAGTAATGTTCTCTTGGACCGGTCCTTTGCGGCCAAGATAGGAGACTTTGGACTTGCGAAGTTCAAGACGGAGAACAGGTTGGAAGCTGAGGCTTTGGGGTGCGAGAGTGACGGTGCCTCTGTTTTTGAGGAGCAATCTCCGGAAAGACCAATTCCATCGCCTGATGCAGTTGTGAAGAAAAATGGGAAGGGTGTGGGGGGCAATTTGGTAAATGAAGAGAACGGAGGTTCATCGGGTGCTGTGTTGAAGGATTATGTGATGGATTGGATTGGGAATGACGTTGGAATGCAGAGACCCAAAGCTGAGTTGACTGCTTCTGCTTCTGCTGCATCTACCAGTGCAAACGATGAGAACAACAACAAGAAGAAGAAGAACAAGAGTAATAGCAGTAGTAGTAGGAGGAAACTGGAATGGTGGGAATCTATGGATGAGGACGGTGATGTTTTGAAGAAGCAGAGAAGAAGGCCTGTGAGGGAATGGTGGAAGGAGGAGTATTCTCAAGAGCTTGCTAGCAAGAAGAAAAAGAAAAACAAAAAGAAGAAAGAAAAGGATAGAAATGGTGCAGAGAGAGAGAGTGATGAGTGGTGGTTCAGGGAGATTAAGAAAAGCGGTAGCAGGAACAGCGTAGATTCATGGGTAGATGATGGTGAAATCCCCAAGAGTGGCGCTATGAGCAGCAACCAAAGCATGAGAGGGACGGTGTTCTATGTTGCTCCAGAGTGTGGTGGCGATGCGTCGGAGAAGTGCGATGTGTACAGTTTCGGGGTGTTATTGCTTGTGATAGTGTCTGGGAGGCGTCCATTGGAGGTGACTACTGGTTCGCCATTGTCGAGCAGTGAGTTTCAGAGAGCGAATCTTGTGTCGTGGGGTCGCCATTGCAGCCGCAAAGGGAAGCTGCTTGATCTTGTTGATGAATCCATTCAGGGTTTGGATAAAGAGCAGGCTCTGCTCTGTATCAAGGTTGCGTTGCTCTGTTTGCTCAAGTCACCGTCTCGTCGTCCTTCAATGAAAGAGATTTTGTTTTTCCATCCCGGGGCACAACAAAGTTAG 1662 0.5199 MPSRHPSTSSPPNKPQNHFFSSASSFFVFFFLCLRNPTRKKNRTTPSSDSDSNPPHRFSYSLLRRATNSFSTILGHGGFGPVFSASLAGKPLAVKLMDSSASLQGEREFHNELLFASRLLRSSSSSTCRHVVPAIGFASDPKRRRFLIVYDLMHNGNLHDALLRRKSPELMRWQTRFSVALDVARGLQFLHSCDPPVIHGDIKPSNVLLDRSFAAKIGDFGLAKFKTENRLEAEALGCESDGASVFEEQSPERPIPSPDAVVKKNGKGVGGNLVNEENGGSSGAVLKDYVMDWIGNDVGMQRPKAELTASASAASTSANDENNNKKKKNKSNSSSSRRKLEWWESMDEDGDVLKKQRRRPVREWWKEEYSQELASKKKKKNKKKKEKDRNGAERESDEWWFREIKKSGSRNSVDSWVDDGEIPKSGAMSSNQSMRGTVFYVAPECGGDASEKCDVYSFGVLLLVIVSGRRPLEVTTGSPLSSSEFQRANLVSWGRHCSRKGKLLDLVDESIQGLDKEQALLCIKVALLCLLKSPSRRPSMKEILFFHPGAQQS* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2129 553 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 544 - -
Ahy9g2129 553 Gene3D Phosphorylase Kinase; domain 1 41 151 - -
Ahy9g2129 553 Coils Coil 366 395 - -
Ahy9g2129 553 MobiDBLite consensus disorder prediction 305 339 - -
Ahy9g2129 553 ProSiteProfiles Protein kinase domain profile. 68 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2129 553 SUPERFAMILY Protein kinase-like (PK-like) 52 545 IPR011009 -
Ahy9g2129 553 MobiDBLite consensus disorder prediction 243 281 - -
Ahy9g2129 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Ahy9g2129 553 SMART serkin_6 68 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2129 553 MobiDBLite consensus disorder prediction 321 339 - -
Ahy9g2129 553 Pfam Protein tyrosine and serine/threonine kinase 71 229 IPR001245 GO:0004672|GO:0006468
Ahy9g2129 553 Gene3D Transferase(Phosphotransferase) domain 1 410 551 - -
Ahy9g2129 553 Gene3D Transferase(Phosphotransferase) domain 1 153 244 - -
Ahy9g2129 553 PANTHER OS07G0586332 PROTEIN 1 544 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2129 Ahy-Chr9 110180449 110185204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2129 424 544 Receptor kinase-like Gene Family AT3G58690 29.921 9.50e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Ahy9g2129 PK_Tyr_Ser-Thr 8.20E-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2129 - - aprc:113872924 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3507 19 157755002 157757051 Ahy9g2129 9 110180449 110185204 hybridization
Ahy15g3426 15 156708376 156711195 Ahy9g2129 9 110180449 110185204 PCT
Ahy5g3024 5 111666076 111668741 Ahy9g2129 9 110180449 110185204 PCT
Ahy9g2129 9 110180449 110185204 Ahy15g3426 15 156708376 156711195 PCT
Ahy9g2129 9 110180449 110185204 Ahy5g3024 5 111666076 111668741 PCT