Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2124 ATGAATCCTTGGAACCCGTGTGATGATTTATACTTTCAGATTTCATCATCTTCTGCTGACTATTCATCCCTCCCTATAATCCAAACATCACCATCAGCCGTGGAAGATCATCATCATCATCAGATCCTGGTTCATGGATATGAATATGATCCTGCTATGGTGGATGCAAGTGCAAGTGTACCACCTTGTCCAAATCAAAAGGGAAAGGGAAAGGGAAAGCAGCCAAAAGAGTTGACTCCTAATAATAATGCTTTGGGAGCAGAAGATGGTGATGAGAACAAGAAGTGGATGCATAGGGAGATAGAAAAACAAAGAAGGCAAGAAATGTCAAGACTTTGCACCACCTTTAGAACTCTTCTACCTTTTGAATATATTAAGGGAAAGCGTTCAACTTCTGATCACATGCATGAGGGGGTGAAATACATCAAACACTTACAGAATAGGGTGGAAAAGTTGCAAGCCAAAAGGGATGAGTTAGTGAAGTTGATTAATTTGAGACCTAAGAGTGGAAGTAGTTCTTCTTCTTCTACACAGCATGATCATCATCATCATTATCATCAAACCTTTGTCATTGTTGAACCCTTTTCCGGGGGAGTTCTGATTAAGTGTAGTTATAGCTTCAGGAACTATGCATTCCCTTTATCAGGTATCTTGGACATTGTGCTTAGACAAGGCCTTAATGTTGTTGATTGTACTTCAATCACCACTGATGATCACAGGTTCATACACACTATCCGATCAGAGGATCCACAAGTGATGACCACTGAGACTGACTACACTGAACTGCAAAGAAAGCTTAAGGAAGCTATATCATCATCAAGTAATTAG 828 0.3998 MNPWNPCDDLYFQISSSSADYSSLPIIQTSPSAVEDHHHHQILVHGYEYDPAMVDASASVPPCPNQKGKGKGKQPKELTPNNNALGAEDGDENKKWMHREIEKQRRQEMSRLCTTFRTLLPFEYIKGKRSTSDHMHEGVKYIKHLQNRVEKLQAKRDELVKLINLRPKSGSSSSSSTQHDHHHHYHQTFVIVEPFSGGVLIKCSYSFRNYAFPLSGILDIVLRQGLNVVDCTSITTDDHRFIHTIRSEDPQVMTTETDYTELQRKLKEAISSSSN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2124 275 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 91 274 IPR015660 GO:0003700|GO:0006357
Ahy9g2124 275 CDD bHLH_AtORG2_like 94 164 - -
Ahy9g2124 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 145 IPR011598 GO:0046983
Ahy9g2124 275 PANTHER TRANSCRIPTION FACTOR 91 274 - -
Ahy9g2124 275 Coils Coil 142 162 - -
Ahy9g2124 275 MobiDBLite consensus disorder prediction 55 92 - -
Ahy9g2124 275 Pfam Helix-loop-helix DNA-binding domain 95 146 IPR011598 GO:0046983
Ahy9g2124 275 Gene3D - 86 170 IPR036638 GO:0046983
Ahy9g2124 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 164 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2124 Ahy-Chr9 110000800 110002372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2124 89 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 36.517 1.04e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g2124 HLH 3.10E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2124 - - adu:107466968 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3508 19 157784947 157786916 Ahy9g2124 9 110000800 110002372 hybridization
Ahy15g3430 15 156758024 156759622 Ahy9g2124 9 110000800 110002372 PCT
Ahy5g3027 5 111731706 111733423 Ahy9g2124 9 110000800 110002372 PCT
Ahy9g2124 9 110000800 110002372 Ahy15g3430 15 156758024 156759622 PCT
Ahy9g2124 9 110000800 110002372 Ahy5g3027 5 111731706 111733423 PCT