Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2108 ATGAGGGACCCTCACTACCATTCGGATAAGTGGGGTTCTCAACTTCTCATCCGTTGCTATTTGCTAGGTGCCAGAAAGCTTCAAACCGCAGTCAACGTATCAAGAGAAGAAGAAGAAGAAGAAGAAGTAGAAGAGATGGAAGCGAATCATGGCGGTTTCAGCGAAGAACCGAACGACACTCAAAGCGCCGACGTATCACCCTCTGAGAAAACGCCAATAGCGAAAGCGCCGGAACCTAGGTTCCCGGAGCCGGTACCTCCGTCTCCGGTGACGGTTCCTATGAAGGAGGAGCTCGCGGACTCCGAGAAGAGCCTTGAGGAGCGTCTCCAGGTGGCGATTGTTCCCACGCCGGTGGCAAGGAGGCCGTCGAAGGACCGCCACACGAAGGTAGAGGGGCGGGGCCGGAGAATCCGGATGCCGGCGACGTGCGCCGCCAGGATCTTCCAGCTGACACGGGAGTTAGGCCACAAGTCCGACGGGGAAACAATACGGTGGCTGCTGGAACAGGCTGAGCCGGCCATCATCGAGGCCACCGGTACAGGAACGATCCCGGCAATCGCGGTTTCGGTGGGTGGCACACTCAAGATCCCAACGACGTCGACGGCGACGCCACAAGGCGAAGAAGAGGCGTCGAGAAAACGAAGAAGAAGGGCATCGAACAGCGAGTTCATTGATGTGAATGAAGAACAACAATCCTCAGTGTCTTCGGGTCTCGCACCAATCACACAAACCGCATACGGCGCTAGTTCTAGTGGTGGTGGACTCGTTCCAATGTGGACTATTGGTGGCGGCGGTGGTGGTTCTAATGGTCCTTTTTTCATGTTCCCAAATGCTGCTGCTACTTCTTCCGGGGATGGTGTTGCGAACCATCCTCATTATTGGGCTTTTCCAGCGAATGCGGCGCCGTATTTCAACGTTCAAGCTCGGCCTATTTCGGGGTTTGTTGCGGCTGAGCAATTAGGCCATGTGGTAGTGCAGCAGCCGCAGCCGCAGCCGCCGCCGCCGCCGCCTAGTTGTTGTTCTTCTAATGGCTCTGCTAACTCTTGTTCTACTCTGGCTCCTAGTTTGAGCTCTGGAACCAGTGCTACTAATAATGGCTCTACTTCTACTTCTAGTGCTGCCACTCAGATGCTTAGGGATTTCTCTTTGGAGATTTACGACAAGAAAGAGTTGCAATTCTTGGCTTGCTCTTCCTCTTCTTCTGCCGTTGCTGAAGCTAAGTTGGAACAACCACCACCTCAGACTCTCAGTTCTAAGCCTTCAAACTGA 1269 0.5429 MRDPHYHSDKWGSQLLIRCYLLGARKLQTAVNVSREEEEEEEVEEMEANHGGFSEEPNDTQSADVSPSEKTPIAKAPEPRFPEPVPPSPVTVPMKEELADSEKSLEERLQVAIVPTPVARRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAIAVSVGGTLKIPTTSTATPQGEEEASRKRRRRASNSEFIDVNEEQQSSVSSGLAPITQTAYGASSSGGGLVPMWTIGGGGGGSNGPFFMFPNAAATSSGDGVANHPHYWAFPANAAPYFNVQARPISGFVAAEQLGHVVVQQPQPQPPPPPPSCCSSNGSANSCSTLAPSLSSGTSATNNGSTSTSSAATQMLRDFSLEIYDKKELQFLACSSSSSAVAEAKLEQPPPQTLSSKPSN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2108 422 MobiDBLite consensus disorder prediction 351 373 - -
Ahy9g2108 422 MobiDBLite consensus disorder prediction 207 223 - -
Ahy9g2108 422 ProSiteProfiles TCP domain profile. 123 177 IPR017887 -
Ahy9g2108 422 PANTHER TRANSCRIPTION FACTOR TCP9 60 399 - -
Ahy9g2108 422 MobiDBLite consensus disorder prediction 77 91 - -
Ahy9g2108 422 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 60 399 IPR005333 GO:0003700
Ahy9g2108 422 MobiDBLite consensus disorder prediction 31 104 - -
Ahy9g2108 422 Pfam TCP family transcription factor 123 213 IPR017887 -
Ahy9g2108 422 Coils Coil 36 56 - -
Ahy9g2108 422 MobiDBLite consensus disorder prediction 195 236 - -
Ahy9g2108 422 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2108 Ahy-Chr9 109849854 109851515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2108 117 394 TCP Transcription Factor Family AT5G51910 49.129 7.35e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy9g2108 TCP 6.10E-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2108 - - ahf:112711692 707.212