Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2102 ATGGATGATGGTAACAACCCTCTACCACCACCTCTTCCTCCTCCGATACAAATCCCACCACCCACTACTCCAGCCCCAACCTCATCGTCCTCTTCCCCCTCTTCTACCGTGCGGTACCGGGGGACACGCTGCCGGAGTGGCAAGTGGGTGTCGGAGATAAGGGAGCCACGCAAGACGACGCGCATTTGGCTGGGGACATACCCAACACCTGAGATGGCTGCTGCTGCCTACGATGTTGCTGCTCTTGCCTTGAAGGGTCCCGATGCGCCTCTCAACTTCCCCGATTCCGTACTCTCTTACCCTATTCCTGCCTCATTGTCTCCTCCTGATATTCGCGCAGCAGCTGCCGCTGCCGCCGCTCAGGCTAGGCTTCCGAAGCCACCGCAGAACCCTCTAGAAGGTAGTGATAGTGCTGGTGGTAGTGGTAATGTTATTGTTGAAGGGTCTTGTTCCAGTTTGAGTACTGGAGAACAAGGAGGGATGATGGTGGGGGAGTACATTGACGAGGATGAGCTTCTGAACATGCCGAGTGTCATCGAAGACATGGCCAGGGGAATGCAGGTTAGCCCTCCAAGGATGCACTCTTTCTCCTCCGATGATTCCCCTGGGAATTCCGATTTAGATACCCTCTGGAGTTTTTGA 642 0.5514 MDDGNNPLPPPLPPPIQIPPPTTPAPTSSSSSPSSTVRYRGTRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDAPLNFPDSVLSYPIPASLSPPDIRAAAAAAAAQARLPKPPQNPLEGSDSAGGSGNVIVEGSCSSLSTGEQGGMMVGEYIDEDELLNMPSVIEDMARGMQVSPPRMHSFSSDDSPGNSDLDTLWSF* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2102 213 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Ahy9g2102 213 MobiDBLite consensus disorder prediction 191 213 - -
Ahy9g2102 213 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Ahy9g2102 213 MobiDBLite consensus disorder prediction 188 213 - -
Ahy9g2102 213 Pfam AP2 domain 43 86 IPR001471 GO:0003700|GO:0006355
Ahy9g2102 213 MobiDBLite consensus disorder prediction 134 157 - -
Ahy9g2102 213 SMART rav1_2 38 100 IPR001471 GO:0003700|GO:0006355
Ahy9g2102 213 ProSiteProfiles AP2/ERF domain profile. 38 94 IPR001471 GO:0003700|GO:0006355
Ahy9g2102 213 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Ahy9g2102 213 MobiDBLite consensus disorder prediction 1 27 - -
Ahy9g2102 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 30 213 - -
Ahy9g2102 213 MobiDBLite consensus disorder prediction 1 44 - -
Ahy9g2102 213 MobiDBLite consensus disorder prediction 118 157 - -
Ahy9g2102 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 30 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2102 Ahy-Chr9 109740298 109741605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2102 39 213 AP2-EREBP Transcription Factor Family AT5G52020 53.552 2.01e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy9g2102 AP2 5.60E-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2102 - - gmx:100776717 219.164