Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2088 ATGCATGCTGCCCCTCTGACACATAACTTCTTTTGCTTCTCTCTCTCACTCTCTCTCACACATGCTTCATGGCATTGCCTCCTTCTTCTTCTTCTTCTTCTTCTTCAACATCATCTGCTTCCTCCAATGGCATTTTTATTTGCATGCACAACCACCACAACAACTGCCTACACCATATTCTTCAAGAAACACCATACTATCATTAAAACATCTCTCTCTCCCTCTCTCTCTCACCCATCCATGGCGAGATACTACAACCTCGGACTCTGCTACCTCCTCCTGTTCCACTTGTTCTGCGGTGCCATTGCTGAACAAAACAACCAAAACCCAGAAAAAATTTCACTACTTTCCTTCAAAAATAGCCTCCACAACCCACAACTCCTCCCTTCGTGGCACCCTGCAACTCCGCACTGCGACTGGGTCGGCGTCACTTGCCAACTCGGCCGAGTCAACTCGCTCTCCCTCCCTTCTCGCAATCTTAGGGGCACCCTCTCTTCCTCCCTTTTCTCTCTCACCTCCCTCGCCACCCTCGACCTTGGCGATAACAACCTCTCCGGTGAACTTCCCGGGGAACTTGGCCGCTTGACTCAGCTGGAGACCCTCCGACTCGGCTCCAACTCGTTTGCCGGAAAATTACCTCCTGAGCTGGGACTCCTCACAGAGCTTCGCACCCTCGACTTCTCCGGCAATGCCCTAGCCGGAGAACTTCCGGAGACTATCGGAAACCTGACCCAACTCGAGTTCCTCGACCTCAGTAATAATCTATTCTCAGGTTCACTACCTTTGTCTCTGTTCACAGGACCCGTATCTCTGATTTCCCTTGACATCTCCAACAACTCTTTTTCCGGCGAGGTTCCGCCGGAGATCGGGAACTGGAGGAACATCACCGCACTCTATGTGGGGAACAACAGATTATCTGGGAGGTTACCTAAGGAAGTTGGTGAGCTTTCAAAGCTTGAGATTTTCTATTCACCTTCCTGTTCCATTGAAGGTCCATTACCCAAGGAAATGGCAAAGCTCAAGTCTTTAACAAAACTTGACCTTTCCTACAACCCCTTGAGGTGTTCAATTCCTGAGTTTATTGGGGAACTTGAGAACCTCAAGATTCTTGACCTTGTTTTTGCTCAGCTCAATGGCTCAGTGCCACCTCAGCTTGGAAGATGTAGAAGCCTGAGGTCTGTTATGCTTTCTTTCAACTCACTCTCTGGTTCATTGCCTATGGAGCTCTCTGAGCTTCCAATTGTAACTTTTTCTGCTGAGAAGAATCAGCTTCATGGGCCATTGCCTTCCTGGCTTGGAAACTGGACCAGTGTTAACTCTCTGTTGCTCTCTGCTAATCATTTCTCCGGTGCGATTCCGCCGGAGCTCGGGAACTGCAGTATGATGGAGCATCTCAGTTTGAGCAGCAATTTGTTGAGTGGAGAAATACCTGAGGAGCTATGCAATGCTGCATCACTTTTGGAGATTGATCTCGATGACAATTTCCTATCTGGCTCCATTGAGAAAGTGTTTGTCAAGTGCAAGAACCTCACTCAGTTGGTCCTCATGAACAATCAGATTGTTGGTTTAATACCTGATTACTTTTCCGAGATTCCCTTGATGGTGCTGGACCTTGACTCCAACAATTTCACTGGCAACATTCCTTCCAGTCTCTGGAATTCGTCCACTCTGATGGAATTCTCAGCCGCAAATAACCGTTTGGAGGGTTCTCTTCCTGTTGAGATTGGCAATGCTGTTATACTAGAAAGGCTTGTTCTTAGCAATAATCAAATTTCCGGTACTATACCAAAGGAAATTGGAAGGCTCACTGGCCTTTCTGTTCTTAATCTGAATGGTAACATGCTTGAAGGGAGTATTCCAATTGAGCTCGGTGATTGCATTTCTCTTACCACATTGGATCTTGGAAACAATAGACTCAATGGCTCCATTCCTGAGAAACTGGTGCAGCTGAGTCAACTGCAGTGTTTGGTTCTTTCTCACAATGATCTGTCCGGGCCTATTCCCCATAAGAACTCTTCCTACTTTCGACAACTTACCATACCGGACTTGAGCTTTGTTCAGCACCTTGGTGTGTTTGATTTGTCCCATAATAGATTGTCTGGCACCATACCTGATGAGCTGGGGGGCTGTGTGGTGGTTGTGGATCTATTGATCAGTAACAACCTGCTATCTGGGAGTATTCCAAGATCACTCTCGCGATTGACTAACCTTACAACTTTGGATTTGTCTGGCAACTTATTGTCCGGTTCCATTCCACCCGAGCTTGGAGATGCCCTTAAGCTGCAGGGTTTATATCTGGGATACAATCAACTCTCAGGTGCAATCCCTGCAAGTTTTGGGAAATTGAGTAGTTTGGTGAAGCTGAATTTGACAGCGAATAAGCTGTCTGGTCCAATTCAAATTAGTTTTCGAAACATGAAAGAGTTGACACACTTGGACTTGAGCTCCAATGAGCTCAGCGGCAAGATTCCGTCCTCACTGTCAGCAGTGCAAAGCCTTGTTGGGGTTTATATCCAGAGGAATCAGCTTTCTGGCCAAGTAGGGGAGCTCTTCTCAAACTCAATGACTTGGAGGATTGAGATTATGAATTTGAGTGAGAACTGGTTCAATGGGAACTTGCCACGATCTTTGGGAAATCTTTCGTACATGACAAATTTGGATCTTCACAGAAATTTGTTGACTGGAGAGATTCCTCCGGACCTCGGAAATCTGATGCAATTGGAGTACTTTGATGTTTCAAGTAATAAGCTATCAGGAAGGATTCCAGAGAAGCTATGCAGCCTAGCTAATCTGAATTTCCTAGATTTGTCTCAAAACAGATTGGAAGGGCCAATACCAAGAAGTGGCATTTGCCAAAACTTATCAAGAGCTAGATTTGTGGGGAACAAAGATCTTTGTGGGAAAATGCTTGGTATTAATTGTCAGATCAAAAGCATTTGCAGGTCGGCTTTTTGCGACGCATGGAGGCTAGCTGCAATTGCCATTACAGTCATACTGATAACTCTGAGCATTGGTTTTGTTCTATATAAATGGTTTAGCAGGAGGCAAAGTGATCCTGAGGAACTTGAGGAGCGCAAACTAAACAGCTATGTGGATCAAAATCTTTATTTCCTGAGCAGTAGCAGATCAAAAGAACCTCTGAGTATCAATGTGGCAATGTTTGAGCAACCTCTTCTGAAATTAACCTTGGCTGATATCCTCGATGCTACTGACAACTTCAGCAAGGCAAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTTTGCCTAATGGAAACACAGTTGCTGTGAAGAAGCTCAGCGAAGCTAAAACGCAGGGTCATCGCGAGTTCATTGCCGAGATGGAAACCTTGGGCAAGGTGAAGCATCAAAACCTTGTTGCATTGCTGGGATATTGCTCAATGGAGGAGGAGAAAGTCCTTGTTTACGAGTACATGGTAAATGGGAGCTTAGATTTGTGGCTAAGAAACAGGACCGGAGCCCTTGAAATCCTGGATTGGAAGAAACGTTACAAGATTGCAACCGGCGCAGCTCGAGGGCTAGCTTTCCTTCATCATGGTTTCATACCCCACATCATCCACAGGGATGTTAAAGCAAGCAACATTCTTCTGAATGAGGAATTTGAGCCAAAAGTGGCAGACTTTGGACTTGCAAGATTGATCAGTGCTTGTGAGACTCACATCACCACTGACATAGCCGGAACATTTGGTTACATCCCTCCTGAGTATGGACAGAGTGGGAGATCCACAACAAGAGGAGACGTGTACAGTTTTGGTGTCATTTTGCTCGAATTGGTGACCGGAAAAGAGCCAACCGGACCTGATTTCAAAGAGATTGAAGGTGGGAATTTAGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGTGAGGCTTCTGATGTTCTTGATCCAACAGTTCTTGATGCTGATTCAAAGGCAACGATGCTTCAGATGCTGCAGATTGCTTGTGTATGCCTCTCAGATAACCCTGTGAACCGCCCTACAATGCTTCAAGTGCACAAGTTCCTCAAGGGATTAGGGGATAATAGTTGA 4059 0.458 MHAAPLTHNFFCFSLSLSLTHASWHCLLLLLLLLLQHHLLPPMAFLFACTTTTTTAYTIFFKKHHTIIKTSLSPSLSHPSMARYYNLGLCYLLLFHLFCGAIAEQNNQNPEKISLLSFKNSLHNPQLLPSWHPATPHCDWVGVTCQLGRVNSLSLPSRNLRGTLSSSLFSLTSLATLDLGDNNLSGELPGELGRLTQLETLRLGSNSFAGKLPPELGLLTELRTLDFSGNALAGELPETIGNLTQLEFLDLSNNLFSGSLPLSLFTGPVSLISLDISNNSFSGEVPPEIGNWRNITALYVGNNRLSGRLPKEVGELSKLEIFYSPSCSIEGPLPKEMAKLKSLTKLDLSYNPLRCSIPEFIGELENLKILDLVFAQLNGSVPPQLGRCRSLRSVMLSFNSLSGSLPMELSELPIVTFSAEKNQLHGPLPSWLGNWTSVNSLLLSANHFSGAIPPELGNCSMMEHLSLSSNLLSGEIPEELCNAASLLEIDLDDNFLSGSIEKVFVKCKNLTQLVLMNNQIVGLIPDYFSEIPLMVLDLDSNNFTGNIPSSLWNSSTLMEFSAANNRLEGSLPVEIGNAVILERLVLSNNQISGTIPKEIGRLTGLSVLNLNGNMLEGSIPIELGDCISLTTLDLGNNRLNGSIPEKLVQLSQLQCLVLSHNDLSGPIPHKNSSYFRQLTIPDLSFVQHLGVFDLSHNRLSGTIPDELGGCVVVVDLLISNNLLSGSIPRSLSRLTNLTTLDLSGNLLSGSIPPELGDALKLQGLYLGYNQLSGAIPASFGKLSSLVKLNLTANKLSGPIQISFRNMKELTHLDLSSNELSGKIPSSLSAVQSLVGVYIQRNQLSGQVGELFSNSMTWRIEIMNLSENWFNGNLPRSLGNLSYMTNLDLHRNLLTGEIPPDLGNLMQLEYFDVSSNKLSGRIPEKLCSLANLNFLDLSQNRLEGPIPRSGICQNLSRARFVGNKDLCGKMLGINCQIKSICRSAFCDAWRLAAIAITVILITLSIGFVLYKWFSRRQSDPEELEERKLNSYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLADILDATDNFSKANIIGDGGFGTVYKATLPNGNTVAVKKLSEAKTQGHREFIAEMETLGKVKHQNLVALLGYCSMEEEKVLVYEYMVNGSLDLWLRNRTGALEILDWKKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEEFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGEASDVLDPTVLDADSKATMLQMLQIACVCLSDNPVNRPTMLQVHKFLKGLGDNS* 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2088 1352 SMART LRR_typ_2 364 388 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 734 758 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 928 953 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 880 904 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 602 626 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 243 267 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 219 242 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 806 830 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 627 650 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 686 710 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 340 362 IPR003591 -
Ahy9g2088 1352 SMART LRR_typ_2 171 195 IPR003591 -
Ahy9g2088 1352 SUPERFAMILY Protein kinase-like (PK-like) 1054 1345 IPR011009 -
Ahy9g2088 1352 SMART LRR_sd22_2 734 749 - -
Ahy9g2088 1352 SMART LRR_sd22_2 806 829 - -
Ahy9g2088 1352 SMART LRR_sd22_2 171 190 - -
Ahy9g2088 1352 SMART LRR_sd22_2 340 366 - -
Ahy9g2088 1352 SMART LRR_sd22_2 904 930 - -
Ahy9g2088 1352 SMART LRR_sd22_2 219 245 - -
Ahy9g2088 1352 Pfam Leucine rich repeat 785 843 IPR001611 GO:0005515
Ahy9g2088 1352 Pfam Protein tyrosine and serine/threonine kinase 1076 1345 IPR001245 GO:0004672|GO:0006468
Ahy9g2088 1352 Gene3D Ribonuclease Inhibitor 108 266 IPR032675 -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 93 203 - -
Ahy9g2088 1352 PRINTS Leucine-rich repeat signature 809 822 - -
Ahy9g2088 1352 PRINTS Leucine-rich repeat signature 928 941 - -
Ahy9g2088 1352 ProSiteProfiles Leucine-rich repeat profile. 342 364 IPR001611 GO:0005515
Ahy9g2088 1352 Pfam Leucine rich repeat N-terminal domain 109 145 IPR013210 -
Ahy9g2088 1352 ProSitePatterns Protein kinases ATP-binding region signature. 1079 1102 IPR017441 GO:0005524
Ahy9g2088 1352 Gene3D Ribonuclease Inhibitor 267 414 IPR032675 -
Ahy9g2088 1352 Gene3D Ribonuclease Inhibitor 676 977 IPR032675 -
Ahy9g2088 1352 Gene3D Ribonuclease Inhibitor 415 675 IPR032675 -
Ahy9g2088 1352 SMART serkin_6 1073 1345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 860 1348 - -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 191 434 - -
Ahy9g2088 1352 SUPERFAMILY RNI-like 152 412 - -
Ahy9g2088 1352 Gene3D Phosphorylase Kinase; domain 1 1035 1148 - -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 93 203 - -
Ahy9g2088 1352 Gene3D Transferase(Phosphotransferase) domain 1 1149 1349 - -
Ahy9g2088 1352 ProSiteProfiles Protein kinase domain profile. 1073 1345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 418 756 - -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 725 878 - -
Ahy9g2088 1352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1195 1207 IPR008271 GO:0004672|GO:0006468
Ahy9g2088 1352 SUPERFAMILY L domain-like 418 680 - -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 418 756 - -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 860 1348 - -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 725 878 - -
Ahy9g2088 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 191 434 - -
Ahy9g2088 1352 SUPERFAMILY L domain-like 675 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2088 Ahy-Chr9 109542382 109546672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2088 111 1346 Receptor kinase-like Gene Family AT5G07280 59.984 0.0 1431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Ahy9g2088 PK_Tyr_Ser-Thr 1.30E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2088 - - aip:107618864 2579.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3537 19 158140918 158145253 Ahy9g2088 9 109542382 109546672 hybridization