Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2083 ATGCTTGAATCCAAATTCAAACCTAAACCGTTACACTTGCACTTCATGCTCATGCTCATTCTCATTCTCCATCAGCATGGCAATGGCACAGAGGCACAGTCCCCGCTCCAGCCGGTGAAACCGCTTTCCTCCAACCACAACCCCCGGGACCCTTCAACCGTCCTCTTCATCGCCACCATCCTCGGAACCTTCATATTCGTCGCCGCGTTCGTAGCCTTCCTCCGCCGCTGCACAGAGCCGTACTTTACTCAACAACAGAGCAATATCACACACTTGCGCTGTTCCTGCTGCAACGGCGGCATCAGCCCCGACATCCTCGAAACCTTCCCCATCGTGTTCTATTCCAGCATCAAGGACCTCAGAATCCGCAAAGAAGCTCCGCTAGAGTGTGCCGTCTGCCTCACCGAGTTCGCCGGCAACGACACTCTTCGGCTGCTTCCACACTGCAACCACGTGTTCCACCCTCCCTGCATCGACGCCTGGCTCTCTTCCCACGTCACCTGCCCCGTTTGCCGCGCCAATCTCAACCAACATCCCTCCCAAGTCGCCATTTCGGTGATAACACAATTGAGCGGCTACGGAGAAGAAGAACACGAAGAAGACGGTTCTGGAAACAGAGCAGAACAGAGCGTGGGTGGCGAGAGCATAATTGAGGGGAGCCCGTTGGCGCGTGACGCGAGTGAGGGACAGCGGAACAACGAAGAAGATAAAGGGATGCCGGAAAGAGCGGCAAAAGGGAAGCTTGGTGGGAAGGGGAGGGTTCTGAAGAGGTCGAATACGACGGGGCACTCGGTGGTGGAGGCAGGAGAGTGTATGGAGAGGTATACGCTGAGGTTGCCGGAGGATGTGAGGAGGTACATTATGGTGAACCATGGGGTGATGATGACGCAGCGTTCGGCGAGCTACAACGCGGCGGAGAGTTCGAAGAAAGGATTGTGTTGGAGTGACACGGAAGGAGGTAGCAGCAGAGGTAAGAAGTGTCAGAGCTCTGTTACAGGGAAGGGAAGAGTATGGAAGAATAATGGAGGTCAGTGA 1035 0.5536 MLESKFKPKPLHLHFMLMLILILHQHGNGTEAQSPLQPVKPLSSNHNPRDPSTVLFIATILGTFIFVAAFVAFLRRCTEPYFTQQQSNITHLRCSCCNGGISPDILETFPIVFYSSIKDLRIRKEAPLECAVCLTEFAGNDTLRLLPHCNHVFHPPCIDAWLSSHVTCPVCRANLNQHPSQVAISVITQLSGYGEEEHEEDGSGNRAEQSVGGESIIEGSPLARDASEGQRNNEEDKGMPERAAKGKLGGKGRVLKRSNTTGHSVVEAGECMERYTLRLPEDVRRYIMVNHGVMMTQRSASYNAAESSKKGLCWSDTEGGSSRGKKCQSSVTGKGRVWKNNGGQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2083 344 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Ahy9g2083 344 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 12 306 - -
Ahy9g2083 344 PANTHER RING FINGER DOMAIN-CONTAINING 12 306 - -
Ahy9g2083 344 MobiDBLite consensus disorder prediction 313 344 - -
Ahy9g2083 344 MobiDBLite consensus disorder prediction 228 248 - -
Ahy9g2083 344 SUPERFAMILY RING/U-box 129 180 - -
Ahy9g2083 344 SMART ring_2 130 171 IPR001841 -
Ahy9g2083 344 CDD RING-H2_PA-TM-RING 129 172 - -
Ahy9g2083 344 Pfam Ring finger domain 129 172 IPR001841 -
Ahy9g2083 344 MobiDBLite consensus disorder prediction 321 344 - -
Ahy9g2083 344 MobiDBLite consensus disorder prediction 193 261 - -
Ahy9g2083 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 181 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2083 Ahy-Chr9 109526153 109527187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2083 12 311 Rapid Response to Elicitors AT3G05200 32.581 4.66e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2083 K10664 - gmx:100782532 214.927