LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g2083	ATGCTTGAATCCAAATTCAAACCTAAACCGTTACACTTGCACTTCATGCTCATGCTCATTCTCATTCTCCATCAGCATGGCAATGGCACAGAGGCACAGTCCCCGCTCCAGCCGGTGAAACCGCTTTCCTCCAACCACAACCCCCGGGACCCTTCAACCGTCCTCTTCATCGCCACCATCCTCGGAACCTTCATATTCGTCGCCGCGTTCGTAGCCTTCCTCCGCCGCTGCACAGAGCCGTACTTTACTCAACAACAGAGCAATATCACACACTTGCGCTGTTCCTGCTGCAACGGCGGCATCAGCCCCGACATCCTCGAAACCTTCCCCATCGTGTTCTATTCCAGCATCAAGGACCTCAGAATCCGCAAAGAAGCTCCGCTAGAGTGTGCCGTCTGCCTCACCGAGTTCGCCGGCAACGACACTCTTCGGCTGCTTCCACACTGCAACCACGTGTTCCACCCTCCCTGCATCGACGCCTGGCTCTCTTCCCACGTCACCTGCCCCGTTTGCCGCGCCAATCTCAACCAACATCCCTCCCAAGTCGCCATTTCGGTGATAACACAATTGAGCGGCTACGGAGAAGAAGAACACGAAGAAGACGGTTCTGGAAACAGAGCAGAACAGAGCGTGGGTGGCGAGAGCATAATTGAGGGGAGCCCGTTGGCGCGTGACGCGAGTGAGGGACAGCGGAACAACGAAGAAGATAAAGGGATGCCGGAAAGAGCGGCAAAAGGGAAGCTTGGTGGGAAGGGGAGGGTTCTGAAGAGGTCGAATACGACGGGGCACTCGGTGGTGGAGGCAGGAGAGTGTATGGAGAGGTATACGCTGAGGTTGCCGGAGGATGTGAGGAGGTACATTATGGTGAACCATGGGGTGATGATGACGCAGCGTTCGGCGAGCTACAACGCGGCGGAGAGTTCGAAGAAAGGATTGTGTTGGAGTGACACGGAAGGAGGTAGCAGCAGAGGTAAGAAGTGTCAGAGCTCTGTTACAGGGAAGGGAAGAGTATGGAAGAATAATGGAGGTCAGTGA	1035	0.5536	MLESKFKPKPLHLHFMLMLILILHQHGNGTEAQSPLQPVKPLSSNHNPRDPSTVLFIATILGTFIFVAAFVAFLRRCTEPYFTQQQSNITHLRCSCCNGGISPDILETFPIVFYSSIKDLRIRKEAPLECAVCLTEFAGNDTLRLLPHCNHVFHPPCIDAWLSSHVTCPVCRANLNQHPSQVAISVITQLSGYGEEEHEEDGSGNRAEQSVGGESIIEGSPLARDASEGQRNNEEDKGMPERAAKGKLGGKGRVLKRSNTTGHSVVEAGECMERYTLRLPEDVRRYIMVNHGVMMTQRSASYNAAESSKKGLCWSDTEGGSSRGKKCQSSVTGKGRVWKNNGGQ*	345

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy9g2083	344	ProSiteProfiles	Zinc finger RING-type profile.	130	172	IPR001841	-
	Ahy9g2083	344	PANTHER	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	12	306	-	-
	Ahy9g2083	344	PANTHER	RING FINGER DOMAIN-CONTAINING	12	306	-	-
	Ahy9g2083	344	MobiDBLite	consensus disorder prediction	313	344	-	-
	Ahy9g2083	344	MobiDBLite	consensus disorder prediction	228	248	-	-
	Ahy9g2083	344	SUPERFAMILY	RING/U-box	129	180	-	-
	Ahy9g2083	344	SMART	ring_2	130	171	IPR001841	-
	Ahy9g2083	344	CDD	RING-H2_PA-TM-RING	129	172	-	-
	Ahy9g2083	344	Pfam	Ring finger domain	129	172	IPR001841	-
	Ahy9g2083	344	MobiDBLite	consensus disorder prediction	321	344	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g2083	Ahy-Chr9	109526153	109527187	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g2083	12	311	Rapid Response to Elicitors	AT3G05200	32.581	4.66e-45	157

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g2083	K10664		-	gmx:100782532	214.927

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