Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2077 ATGGGGTTGCAGCCACTGGAAAAAGCAAAACCAAAATACAAGAAGGGTTTATGGTCACCAGAAGAGGACAATAAGCTCAAAAACCACATTGTAAAGCATGGTCATGGCTGCTGGAGTTCTGTTCCTATTAAGGCAGGTTTACAAAGGAATGGAAAAAGTTGCAGACTGAGGTGGATTAACTATCTAAGGCCAGGATTGAAGAGGGGCTTGTTCAGCAAACAAGAGGAGGAGACAATCCTCACCCTTCACCAGATTCTAGGCAACAAGTGGTCTCAGATAGCACAAAATTTGCCGGGAAGAACTGACAATGAGATAAAGAACTATTGGCATTCATATTTGAAAAAGAGAGTGATGTCCAATGCTAAGGAAATGGAATCTCATGAACAAGTTCAGTATGCTACCTCAAGCTCAGAAACCATGGATTCTTCTTCACATGCTGTCCAGAATCTTGCAACACAAGGCACACAAAATACCTACAGCTTCACCAATGAGGCTTGTCAAAGCTCCCCCATACCAAAACTTCTATTTGCTGAGTGGCTTACACTTGATCATGTGCAATGTGGTGGCAACTCTGCTAATTCATATGATGAATCTTTGGCTTTGAAGGATGGATTTGACAGTCAAATTTCGTCTTTTCAAGAATCTGCTACAGTACATGATGCTATGTCACAAGGACCCTTTGGAGGAGATTATCGTAATAATAGTCTAGCTCGTCTAGCTCATAGTTCAGCCGAAGAGATGTTCAATTCACAGCTAAAGTTTGGAACAACAATGGTAGAAAATGGATTCATCCAATGTATACCTGGGGTTGATTTTAGTGCCAATTTCAACATGAGCAATGATACGATGTATATCTATGATAATAGCATTATTTCCACGGCAGCTCAAAATGGAATGTAA 900 0.4067 MGLQPLEKAKPKYKKGLWSPEEDNKLKNHIVKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGLFSKQEEETILTLHQILGNKWSQIAQNLPGRTDNEIKNYWHSYLKKRVMSNAKEMESHEQVQYATSSSETMDSSSHAVQNLATQGTQNTYSFTNEACQSSPIPKLLFAEWLTLDHVQCGGNSANSYDESLALKDGFDSQISSFQESATVHDAMSQGPFGGDYRNNSLARLAHSSAEEMFNSQLKFGTTMVENGFIQCIPGVDFSANFNMSNDTMYIYDNSIISTAAQNGM* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2077 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Ahy9g2077 299 CDD SANT 71 113 IPR001005 -
Ahy9g2077 299 CDD SANT 18 62 IPR001005 -
Ahy9g2077 299 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Ahy9g2077 299 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Ahy9g2077 299 PANTHER MYB DOMAIN PROTEIN 55 157 278 - -
Ahy9g2077 299 PANTHER MYB DOMAIN PROTEIN 55 1 155 - -
Ahy9g2077 299 Gene3D - 15 67 - -
Ahy9g2077 299 SMART sant 67 115 IPR001005 -
Ahy9g2077 299 SMART sant 14 64 IPR001005 -
Ahy9g2077 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Ahy9g2077 299 Gene3D - 70 142 - -
Ahy9g2077 299 PANTHER MYB TRANSCRIPTION FACTOR 157 278 - -
Ahy9g2077 299 PANTHER MYB TRANSCRIPTION FACTOR 1 155 - -
Ahy9g2077 299 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Ahy9g2077 299 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Ahy9g2077 299 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2077 Ahy-Chr9 109465613 109467363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2077 8 261 MYB Transcription Factor Family AT3G48920 44.961 1.16e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy9g2077 Myb_DNA-binding 6.10E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2077 K09422 - gmx:778167 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3548 19 158194883 158196550 Ahy9g2077 9 109465613 109467363 hybridization