Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1955 ATGAGAAATGGAAATAGGCAGGGGAGGAGGAAGAAGAGGAGGAGTTTGAAGAACATGATGCAGTGCCTGTGCTCAGGGGAGCAGTTGAGACGAGGAGGCATGGATGAGATGGCAGTTCTTTCGTCATCGGATTCTCTTGCCACCAAGGACTATTATTTAGCCACGACGGGCAGCGGCCGTTCTGGCCAGGATGGACAACTTCAAGGAAGGCTGGATGCAGGAAATATCAAAGACGCTGAATTGTCGTTGCGTCTAAAAAGGTGTGGAAAAAGTTGTAGATTGAGATGGCTTAACTATTTGAGGCCTAACATTAAGCATGGTGAATTCTCCGACGAGGAAGACAGAATAATCTGCAGTCTTTATGCTAATATTGGAAGCAGATGGTCAATTATAGCAGCACAGTTGCCAGAAAGGACTGACAATGATATAAAGAACTATTGGAACACCAAGCTCAAGAAGAAGCTCATGGCTTTGCTTCCCAGTCATCATCATAATCAACAAAACCCACCACCATTCATTTCTGATTAA 528 0.447 MRNGNRQGRRKKRRSLKNMMQCLCSGEQLRRGGMDEMAVLSSSDSLATKDYYLATTGSGRSGQDGQLQGRLDAGNIKDAELSLRLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICSLYANIGSRWSIIAAQLPERTDNDIKNYWNTKLKKKLMALLPSHHHNQQNPPPFISD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1955 175 ProSiteProfiles Myb-like domain profile. 101 151 IPR001005 -
Ahy9g1955 175 PANTHER OS09G0431300 PROTEIN 85 165 - -
Ahy9g1955 175 SMART sant 105 153 IPR001005 -
Ahy9g1955 175 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Ahy9g1955 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 155 IPR017930 -
Ahy9g1955 175 SUPERFAMILY Homeodomain-like 86 155 IPR009057 -
Ahy9g1955 175 PANTHER MYB DNA-BINDING DOMAIN SUPERFAMILY PROTEIN-RELATED 85 165 - -
Ahy9g1955 175 CDD SANT 108 149 IPR001005 -
Ahy9g1955 175 Gene3D - 66 105 - -
Ahy9g1955 175 Gene3D - 108 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1955 Ahy-Chr9 106591661 106593192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1955 57 157 MYB Transcription Factor Family AT5G57620 67.619 4.74e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy9g1955 Myb_DNA-binding 5.80E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1955 K09422 - zju:107411467 163.31