Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g1937 | ATGGCGAATGGTATCACGCACCAGCCTTCTCCTTCCATGCTCGTGGACCAGTTTAACGCCTTACTTCCACGGCGCCAAAGCTACCTCAAGGCTTTCTCTACCGAAGAAATTGTTCGGACGTATGGGCTATTGTTGTCAGAACTCACCTCCAATGTGAATCCCATCATTACCGATCTCACTATCATTGCTGGCCAGCAGCGGAAACACGCCAAGGGCATCGCCGATGCCATTTGCAACCGGATTCTTGAGGTTGGTGGTGATCGGTTGGACTCAACGGGAACTGTAGGTAATACAAGAGAAGGAGGGTTGAATGAATGGCAGCAAAAGAGATTTTCTAGTGATGGTTGGAACATATTCCAAACTTCCAAGACTTATAATCTCAATGATGAACAACGACGTCAAAGTCCAAGAGCTCTTATTGAGGCATATGGTTGTGACAAAGGCCGTGAAATTCCTAGTACTAAGCTTTTGTTTGTGGAGCAGCAGCCTGGCAGAAATGGTTTAGGGAGCAAGTTTCCATTGGCATCATGGCAGCACACTGAAGAAGAGGAGTTTGATTGGAAAGATATGAATCCAGGATTAGTAGACTGTAGTAGAAACAGCAGTTCTATGCAATCAAGTGTTAGATTCTCCAGGAAAAGGAAGTTATCTAATGATCTATCTAATTCTTCACATTACCCGTTCAATATGGGGGCTGCTTCCCCTGCTTTCAATGCTCATGCTACTCGTCCTTCCGGCTTGAATCCAGCATTTCCATTGCAAAAACGTCCTAGGAGTCTGCTTGAACCAATAAACATTAATAATAACACCAATGTGGGTCATGGTCCAAATAGAACTCTGTTTATACATGACCAGTTGCCTAATCAACCTGGACCAATTTCCTCTAACCTGCAAAATCATGGACAAGCACCTCAACTACAGTTTCTTCCACCTCAAGTTCCATCTTCAACACAAATTAGTCATGGGAGCTCTTTGCATTTACATGGGGGAACCTTGCCACCTTTACGTCCAAGCCTCCCAACTGCTCCATCACAAATGATGTCTCATCCCCATGCCCATGATTCGATGACAAGTCAACCACCACCTACATATCTTGATTTGATTAGTTCACTAGTGAATCATGGTGTGATCTCGGTAACCAATCCACCTACCGGACTGGATTCCATTGGGGCGGAGTTCGATCCAGATATCTTGAAGGTTCGTCATGAAGGTGTAATCAGTGCCTTATACAGTGATCTTCCTAGACAATGCACGAGCTGCGGTCTCCGATTCAAAAGGCAAGATGAGCACAGTAGACATATGGATTGGCACGTGACTAGGAACCGAATGTCAAAAAGCCGGAAGCAAAAGGGGTCTCAAAAGTGGTTTGCAAGTGGGAGCCTGTGGCTAAGTGGTGCAGAGGCTTCGGGAAAGGAATCGATTCCAGGGTCGCTGGCTCCCGAAGAGACAGAGGAAATGAAAGACGAGGAAGAGTTAGGCGTTCCTGCTGAAGAGGATCAGAGTAGATGTGCACTGTGTGGAGAGGGATTTGATGAGTTTTACAGCCACGAAATGGATGAGTGGATGTATAGAGGAGCCACATACCTTAAGGCACCCACGGGAACAACATTGGCCACCATGGACAGACATCAACTAGGGCCCATTGTTCATTCCAAATGCAGATCTGACTCTGACTCTACTATGCCCTCAACCAACAGGAAACCTACCAAGAGAGTAGTAAGAGAAAAAGAATGCGGGTCAACCAAACATCAGTTTTGTGCACCCATAATTAGGACTTGCTAA | 1782 | 0.4585 | MANGITHQPSPSMLVDQFNALLPRRQSYLKAFSTEEIVRTYGLLLSELTSNVNPIITDLTIIAGQQRKHAKGIADAICNRILEVGGDRLDSTGTVGNTREGGLNEWQQKRFSSDGWNIFQTSKTYNLNDEQRRQSPRALIEAYGCDKGREIPSTKLLFVEQQPGRNGLGSKFPLASWQHTEEEEFDWKDMNPGLVDCSRNSSSMQSSVRFSRKRKLSNDLSNSSHYPFNMGAASPAFNAHATRPSGLNPAFPLQKRPRSLLEPININNNTNVGHGPNRTLFIHDQLPNQPGPISSNLQNHGQAPQLQFLPPQVPSSTQISHGSSLHLHGGTLPPLRPSLPTAPSQMMSHPHAHDSMTSQPPPTYLDLISSLVNHGVISVTNPPTGLDSIGAEFDPDILKVRHEGVISALYSDLPRQCTSCGLRFKRQDEHSRHMDWHVTRNRMSKSRKQKGSQKWFASGSLWLSGAEASGKESIPGSLAPEETEEMKDEEELGVPAEEDQSRCALCGEGFDEFYSHEMDEWMYRGATYLKAPTGTTLATMDRHQLGPIVHSKCRSDSDSTMPSTNRKPTKRVVREKECGSTKHQFCAPIIRTC* | 594 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g1937 | 593 | PANTHER | POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 | 11 | 83 | - | - | |
Ahy9g1937 | 593 | MobiDBLite | consensus disorder prediction | 199 | 220 | - | - | |
Ahy9g1937 | 593 | SUPERFAMILY | ENTH/VHS domain | 34 | 84 | IPR008942 | - | |
Ahy9g1937 | 593 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 128 | 558 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
Ahy9g1937 | 593 | Gene3D | - | 29 | 88 | IPR008942 | - | |
Ahy9g1937 | 593 | PANTHER | POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 | 128 | 558 | - | - | |
Ahy9g1937 | 593 | MobiDBLite | consensus disorder prediction | 467 | 498 | - | - | |
Ahy9g1937 | 593 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 417 | 437 | IPR013087 | - | |
Ahy9g1937 | 593 | MobiDBLite | consensus disorder prediction | 312 | 359 | - | - | |
Ahy9g1937 | 593 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 11 | 83 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
Ahy9g1937 | 593 | MobiDBLite | consensus disorder prediction | 341 | 359 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g1937 | Ahy-Chr9 | 106116833 | 106122107 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy9g1937 | 14 | 84 | C2H2 Transcription Factor Family | AT4G04885 | 53.247 | 2.50e-16 | 80.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ahy9g1937 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g1937 | K14400 | - | aip:107640327 | 640.573 |