Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1935 ATGACAGATGTTCAGCCGCTACAGCAGAAGCCTGAGTCTGCCGATGCTCATGCTGAGTTCGAGCGTGGACTGGAGGACTTTATGCGTGGGCAGTTGGATGATTGTATGTCATTTGCCTCCTGTAGTTCCTCCCAGGCTCAGGGGGATGAGGAAGATGAGGGTGATCAGCTCGCTCGGAGGAGGCGTAGGTCTGATCTTGAAGGGGATGATTTGGCGGAGTCCTCGGCTGCACAGAGGCGCCACTCGCGAATTTTGAGTAGGTGGGCTGCCCGGCAGGCACAGGAGATGATAACTACTATTGAGAGGAGGAATCGTGAGTCTGAGTTGATGGCGCTGGCTGGGTTGCACACGGTGTCTATGTTGGACTCCTCTTTCTTGAGGGGATCACAGTCCCCAACTTCTGGACAGGAGGGTGCCGTGGAGAGACCGAGCACTCAGGCATCTGCTATTCTGCAGATGTGGCGCGAATTGGAGGATGAGCATTTGTTGAACAGGGCTCGTGACAGGATGAGGGAAAGGTTGAGGCAACAGAGGGGTTCTGAGTCTAATACCAATGGATCCAGTACCATGTCTGATAGTCGAGGCAGTGAGAATCAAGGCAGTTTGGGGGATGCGAGTGAAAGCGAAAATGATTTTGGTACTTGGTCGCATGATCGGATTGAATCGCGGAATGCACGTGGGGATCATCTTGTCTCAAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTCGAGAGGGAGAGAGTTAGACAGATTGTTCGAGGATGGATGGAAAGCGGTATTGGTGATCATTCATCGAATGTGAATCAGAGAAACAATAATGGTAGAGCAGAATGGCTTGGAGAAACAGAGCGTGAGAGGGTAAGAATTGTCAGGGAATGGGTGCAAATGACTAGCCAACAGAGAGGCTCACAGAGAGGCTCACGTGGGAGCCGGAGGGATGCTCAAGTCGATCGAGCGCGCGATGTGGTTGCTGATCACGATGAAGGCCAGCCAGAGCATGTTCGGCGGGACATGTTGAGGCTGCGTGGAAGACAAGCTCTAGTTGATTTGCTTGTGAGGATAGAGAGGGAAAGGCAAAGAGAGCTGCAGGGATTGTTGGAGCACCGAGCTGTATCTGATTTTGCTCACCGCAACCGCATTCAGTCTTTGCTCAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGACCTCCGTCTATGGCTGCAAGTGAATTAGTGCAGTTGAGACAACGACATACAGTCTCTGGTATAAGGGAGGGGTTTCGTTCAAGATTAGAGAATATTGTTCGTAGTCAAGCAAGTACCAATTCTGATACTGCATCAAATAGTAACATTAGTGAAAGTGATGGGAGCCAAGCAAACAACCTGTTGGATGCCCAACAAGAAAATTATGAACAAGAGCAGATTAGGAACTTGGAATCTGATGTCCGTCAGTTGCCTAGTCAAACAGGAACTGTGGAGGGTAGCACAAATGAGAGTATTAGTTGGCAAGAAGGTGGTAATCAAGGAGGAAATCGGCAGGAACAGATTACTGAAGATGCAGAAGGAAACTGGCAGCAGAGTACCTATGATTGGCCACAAGAAACTCCCAGAAATTTAGCTGGGGAAGACACACATCCACGAGAAGCACAGAGAGTGTGGCATGAGGATAGTTCAAGGGAAACTGTTGGTAATTGGTCTGAAGGACCTTCTGTAGCTCCAAGGAATCGCCGTGGTGTTCCTATTAGAAGATTCAATAGATTTCATCCACCCGATGATGATAACGTGTACAGCATGGAGCTTAGAGAGCTGCTAAGCAGGAGAAGTGTTTCTAATCTTCTTCGCAGTGGCTTCCGTGAAAGTCTTGACCAATTAATTCAGTCATATGTGGAAAGGCAAGGTCGTGCACCAGTTGACTGGGATTTGCATAGGAACTTGCCCATACCAACTCCTGCCTCAACTGAACAGGACACTGATCAGCAAGGGGATGAACGCAATGAGGGTCGGCATGAAGGTATCAACAGACCTACGCTGGTGATGCCGTCACCTCCAGTACCTCCACCACAACCACTGTGGCACCAGGATCTCCATCAAACTGGATGGTCTCGCCATAGCATGCATCGTTCTGAAATCGAATGGGAGATAATGAATGATCTAAGATCTGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAGAGGATGTTGGAAGCGTGCATGGATATGCAGCTTGAGTTGCAGCGCTCTGTCAGACAGGAAGTTTCTGCAGCTCTGAACCGCTCAGCTGGTGAAAATGGCATGGTTGCTGAGACATCTGATGATGGGTCCAAGTGGGGGCATGTGAAAAAGGGAACTTGCTGCGTTTGTTGCGATAACCATATCGATTCACTTCTGTATAGATGCGGGCACATGTGCACTTGCTCAAAATGTGCCAATGAGTTAGTTCGTGGCGGAGGTAAGTGTCCTTTATGCCGAGCACCGATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA 2508 0.4924 MTDVQPLQQKPESADAHAEFERGLEDFMRGQLDDCMSFASCSSSQAQGDEEDEGDQLARRRRRSDLEGDDLAESSAAQRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARDRMRERLRQQRGSESNTNGSSTMSDSRGSENQGSLGDASESENDFGTWSHDRIESRNARGDHLVSSREQSPDLGEVERERVRQIVRGWMESGIGDHSSNVNQRNNNGRAEWLGETERERVRIVREWVQMTSQQRGSQRGSRGSRRDAQVDRARDVVADHDEGQPEHVRRDMLRLRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAASELVQLRQRHTVSGIREGFRSRLENIVRSQASTNSDTASNSNISESDGSQANNLLDAQQENYEQEQIRNLESDVRQLPSQTGTVEGSTNESISWQEGGNQGGNRQEQITEDAEGNWQQSTYDWPQETPRNLAGEDTHPREAQRVWHEDSSRETVGNWSEGPSVAPRNRRGVPIRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPVDWDLHRNLPIPTPASTEQDTDQQGDERNEGRHEGINRPTLVMPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGMVAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVVRAYSIL* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1935 835 MobiDBLite consensus disorder prediction 637 681 - -
Ahy9g1935 835 SUPERFAMILY RING/U-box 782 828 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 40 83 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 211 245 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 433 454 - -
Ahy9g1935 835 Pfam Zinc finger, C3HC4 type (RING finger) 780 827 - -
Ahy9g1935 835 Coils Coil 712 732 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 537 558 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 295 329 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 179 210 - -
Ahy9g1935 835 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 764 833 IPR013083 -
Ahy9g1935 835 ProSiteProfiles Zinc finger RING-type profile. 783 822 IPR001841 -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 654 668 - -
Ahy9g1935 835 CDD mRING-HC-C3HC5_NEU1 782 822 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 173 245 - -
Ahy9g1935 835 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 1 835 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 306 329 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 480 531 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 1 22 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 52 77 - -
Ahy9g1935 835 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 835 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 125 146 - -
Ahy9g1935 835 MobiDBLite consensus disorder prediction 480 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1935 Ahy-Chr9 106042153 106047663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1935 783 829 C3H Transcription Factor Family AT3G06140 42.553 1.46e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1935 - - gmx:100805607 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2360 19 138254888 138260367 Ahy9g1935 9 106042153 106047663 hybridization