Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1903 ATGTTTTCAAGGTTGGTACATCCCTGCGGCGGTGGCGGTGATGGCGACGGAGTGGAAGAGATGATGGTGCAGGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGAGCCGTCTCTGGTTTTGACCTCTGATCCGAAGCCTCGGCTTCGTTGGACCACGGACCTCCATGAACGCTTCGTTGATGCTGTCACTCAACTCGGCGGTGCCACCAAAGCCACACCAAAAGCGATTTTGCGGACAATGAATGTCAAGGGTTTGACTCTATATCACTTAAAGAGTCATCTGCAGAAATACAGGCTTGGTAAGCAATCTGGAAAAGATTTTGATGAGGGATGCAAAGATGCTTCGTACCCTCTGGAAAGCCCCAGTACAAATAACTCATCTCCTAAGGCGTCTTATGATGCAAATGAGGGCCAAGAAGTAAAGGAAGCATTAAGGGCACAAATGGAAGTGCAAAGTAAACTACATTTGTTAGTGGAGGTACTGTTGCAGGCAGAGAAGCACTTGCTAATTTGCCAGGATGCTGAACAGACATATATGGTCATGCTTGAGAGAGCTTGCAAGATGCTGGCTGATCAAATTATTAGCAATCCAATGGTCGACACAGGCAGCCAAAGGTTGGAAGGATTGCATGTTTCGGAAGTGCTGGTGCCTTCGCTTATTCTGCTGCCCCAGGGAACTGAAAGCTGCCTAACATCACTTGAGAATCTCGGCGGATTGACGCTGGAGGGATCTCCAAGCGGGGCAAGGAAGAGAATTCTGAATTTAGACTCAGTGGTAGCTCCTTTGATGTGGAACGAAGCTAACATGAGAACTCAGGGTATCCATTCAAGTCAAGTGAATCCTCATCACGAAATAACTGGGTATGGTATGTAG 879 0.4858 MFSRLVHPCGGGGDGDGVEEMMVQGGGGGGGGGGGGEPSLVLTSDPKPRLRWTTDLHERFVDAVTQLGGATKATPKAILRTMNVKGLTLYHLKSHLQKYRLGKQSGKDFDEGCKDASYPLESPSTNNSSPKASYDANEGQEVKEALRAQMEVQSKLHLLVEVLLQAEKHLLICQDAEQTYMVMLERACKMLADQIISNPMVDTGSQRLEGLHVSEVLVPSLILLPQGTESCLTSLENLGGLTLEGSPSGARKRILNLDSVVAPLMWNEANMRTQGIHSSQVNPHHEITGYGM* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1903 292 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Ahy9g1903 292 Pfam Myb-like DNA-binding domain 50 100 IPR001005 -
Ahy9g1903 292 MobiDBLite consensus disorder prediction 119 135 - -
Ahy9g1903 292 MobiDBLite consensus disorder prediction 112 139 - -
Ahy9g1903 292 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 211 - -
Ahy9g1903 292 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 211 IPR044848 GO:0003700
Ahy9g1903 292 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 208 291 - -
Ahy9g1903 292 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Ahy9g1903 292 Pfam MYB-CC type transfactor, LHEQLE motif 141 190 IPR025756 -
Ahy9g1903 292 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 208 291 IPR044848 GO:0003700
Ahy9g1903 292 MobiDBLite consensus disorder prediction 1 39 - -
Ahy9g1903 292 Gene3D - 46 104 - -
Ahy9g1903 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1903 Ahy-Chr9 105345090 105347036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1903 36 213 G2-like Transcription Factor Family AT3G24120 54.098 6.38e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy9g1903 Myb_DNA-binding 1.10E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1903 - - aip:107619379 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2325 19 136833304 136835354 Ahy9g1903 9 105345090 105347036 hybridization