Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1896 ATGGATATCGAAGGAGAAGCAACATACTTAGAAAGTGACGAGGGAGGCCAAAACATGAAAGAGACACAGAAGAATGTGAGTTGCACATGTGCATGTCGTGGAAGCAGTAGATATTGTGGTGTTCTAACAACAGAGGACATAAGAAACCACTCATGGATGACATCTGATGCAGCATATGAGTGCTATGTTAGTTATGCTAAAAGTGTTGGGTTTGGAGTCCGTAAGGGAGATGCTGCTCGTGGCAAAGATGGGAAATATAGAAGGCGACGGTTCTTTTGCAACAAGGCAGGACACAGAGAGGAGAAATATTACAACAATCCGAATAGGAAGAGGGAGCACAAGGCAGAGACTCGAACTGGTTGTGAGGCAAAGCTGTCCATTTACCTTGATGAAAGTTCTTCAGTTTGGAAGGTTAGGAAACTAGTTGAGGAGCATAATCATGAGTTAATACCACAATGCCTTGTCCACCTAATTCCAAATCATCGTCGTTTGACCGATGCAAACAAAGCTCAGACTGACACAATGATCATGCATGGACTCCCTACTTCTCAAATTATGGGATATCTAGTTGGACAAGCAGGTGGGTATCATAGAGTTGGCTTTTCAAAGAAAGATTTGGATAATTATATAGAAAGAAGTAGACGGGCAAGGATTATTGGTGGCGATTCAAATGCTACCATAGGATACTTGAGTGGCAAGGCTGATCTAGATCCGATGGCGATGGCACGCTATAGTTCTACCCTTGAAGATAGATTGGGCAACTTATTTTGGGCAGATGGAATGTCCAGGGCTGATTACCAGTTGTTTGGCGACGTCCTAGCATTTGATACCACGTACCGAAAGAACAAGTATAAAAAGCCACTGGTGATATTTTCTGGTAGTAATCACCATAGGCAAACTTGTATTTTTGGTTTCGCTGTGTTAGAGGATGAATCAGGACCGACTTACACATGGTTGTTGAAGAACTTTCTGGATGTTATGCTGGGTAAATCTCCTACTGTTGTGGTAACCGATGGAGATGAAGGCATGAAAGAGGGTATTGCGAATGCATTCCCTAATGCTACCCATAGATTATGCGGTTGGCACCTTCACAAAAATGCAACGTCTAACATCAAGGATCCAACATTTTGTGCAGAATTTAAAAAGTGCATGTATGGCAAGTGGCATCCCGATGAGTTCGAGCTCCGTTGGGCTAAGATGGTAGATACTTTTGGTCTGCAAAATAATGAATGGGTTAACATTCAATATGCTAGGAAGGAAAATTGGGCTAGTTCTTACTTGATGGACAAATTTTGTGCTGGGTTTAGGACTACCTCACGATGTGAGGGCATCAACAATTATGTGAAAACTTTCATTAACTCTCATCATTGTCTGTTGGACTTGGTGACTAATCTTGAACGTGCTGTTCGAGATTACAGGAACAATGAAATGGTTGCCCAATTCAAGACTATCTATGGTGAACCTGTGTTGACCACCGGTTTAACCAATCTTGAACGTAGTGCTGCAGAAGCATACACGAAGGAAATATACAGGTTGGTTAAAAAGGAGATTCAGGCCGTGGTTGCACTTGAGTTAATAGAGGATCGAAGTATATCCACAACAATGATTTATAAGGTGTATCATCATGAGAATAGGGATCGTTTGTACACTGTTATGTATGATCGCAATGACAAGAATATAGAGTGTGAATGTAAAAGATGGAATAGTGAGGGCATTCCTTGTAGACATATGTTTTGTGTCATGAAACGGGAAGCTTGTAAAGAAATTCCAGAGAAGCTCATTTTAAAGAGATGGACTAAGAGAGCAAAGCATTTTTCCAATGAGACAAATGTTAGGCAAAGCGAGATTGAAAAAGAGAGAGGGTTTTTAATGAGATTTGCAGCATTGTCCGTGGCCACTACCTGGATGTCTTTCATTGGAGCACAAGAGCTTCCCCTTTTCCATCACACGATGAAAGAAGTGTGCAGATTGACAAGAGAGATTGAAACAAAGACCTCAAAGAAGCAACGTACGGAGGAGGCACCTACACAGAGCATTATTGGTGACCCAAGTGTTGTGAAGACAAAAGGCGCACCTAAATTGAAGAAAGATGAAAAAGGGAGGAGGAAGTGTAAAAATTGTGGGAAAGAAGGTCACACAAAGAGGACTTGTGCTATTAGTGGGAAAGAAGAAACCCATGCAATGAATGAAGAATTGAACACCACAATTGATGAAGCTAAAACTCATGAGATGGATCCTATTGTAGCTTCACAGATGTCGTCAATCATCGGCAACACACCACCTAACGAAGATGTTGCTAGAGATACAAATGAGTTAAATCCAAGGTTTAGTGTTGTTAATTGCATTCCCCTAATATCCAACAACTTAAATGAAATACCACAAGGGTCTTATCGGTGGATGCTACAGGTAATGCAAAATCGTATGGCAAACAAGTGA 2436 0.413 MDIEGEATYLESDEGGQNMKETQKNVSCTCACRGSSRYCGVLTTEDIRNHSWMTSDAAYECYVSYAKSVGFGVRKGDAARGKDGKYRRRRFFCNKAGHREEKYYNNPNRKREHKAETRTGCEAKLSIYLDESSSVWKVRKLVEEHNHELIPQCLVHLIPNHRRLTDANKAQTDTMIMHGLPTSQIMGYLVGQAGGYHRVGFSKKDLDNYIERSRRARIIGGDSNATIGYLSGKADLDPMAMARYSSTLEDRLGNLFWADGMSRADYQLFGDVLAFDTTYRKNKYKKPLVIFSGSNHHRQTCIFGFAVLEDESGPTYTWLLKNFLDVMLGKSPTVVVTDGDEGMKEGIANAFPNATHRLCGWHLHKNATSNIKDPTFCAEFKKCMYGKWHPDEFELRWAKMVDTFGLQNNEWVNIQYARKENWASSYLMDKFCAGFRTTSRCEGINNYVKTFINSHHCLLDLVTNLERAVRDYRNNEMVAQFKTIYGEPVLTTGLTNLERSAAEAYTKEIYRLVKKEIQAVVALELIEDRSISTTMIYKVYHHENRDRLYTVMYDRNDKNIECECKRWNSEGIPCRHMFCVMKREACKEIPEKLILKRWTKRAKHFSNETNVRQSEIEKERGFLMRFAALSVATTWMSFIGAQELPLFHHTMKEVCRLTREIETKTSKKQRTEEAPTQSIIGDPSVVKTKGAPKLKKDEKGRRKCKNCGKEGHTKRTCAISGKEETHAMNEELNTTIDEAKTHEMDPIVASQMSSIIGNTPPNEDVARDTNELNPRFSVVNCIPLISNNLNEIPQGSYRWMLQVMQNRMANK* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1896 811 Pfam FAR1 DNA-binding domain 61 150 IPR004330 -
Ahy9g1896 811 ProSiteProfiles Zinc finger CCHC-type profile. 702 717 IPR001878 GO:0003676|GO:0008270
Ahy9g1896 811 ProSitePatterns Transposases, Mutator family, signature. 338 362 IPR001207 GO:0003677|GO:0004803|GO:0006313
Ahy9g1896 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 618 IPR031052 GO:0006355
Ahy9g1896 811 SMART 26again6 560 587 IPR006564 GO:0008270
Ahy9g1896 811 Pfam MULE transposase domain 272 366 IPR018289 -
Ahy9g1896 811 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 55 618 - -
Ahy9g1896 811 MobiDBLite consensus disorder prediction 689 712 - -
Ahy9g1896 811 MobiDBLite consensus disorder prediction 664 712 - -
Ahy9g1896 811 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1896 Ahy-Chr9 105022507 105028042 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy9g1896 MULE 3.90E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1896 - - ahf:112717474 952.584