Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g1880 | ATGAACAACACTTCCAATTCTACTGAGGACTCTCAAGAGGACATAACCGGATACACGTATTATTCGGTTTCTTTGTCTCTTGGCTTCCTCCTCTTGATGGCATTCATAGCTCTCACTGCATACTACTGCAGCAAAAGCAGGATTCGAGACGAGCGAACCGGACCAAGCTCCGGAAGAACCAATAGCAGTTTCAATTCAAACAGGACAGTGATCATGGACAGAGACCCATCCTCTATAACAATCCAAATTGGTGAGGAGCAACAACAAATGCAAGAATCAATCCTCAAAAGTTATCCTATGTTGTTGTTCTCCCAAGCCAAGCTTCATCAAAAGGCAGATGATCCAACAGAACTTCTTAGTTGCTCAATATGTTTGGCAGATTATGCAGACTCAGAGTGGTTACGGCTATTACCTGATTGTGGCCATTTTTTTCATAGGGATTGTATTGATGTATGGTTGAGGCTAAACCTTTCTTGTCCAATGTGTAGGAACTCTCCATTACCCACCCCTCTTGCTGAAGTTGCTCCCTTGGCCGCTACAAGGGCTTATTGA | 552 | 0.4366 | MNNTSNSTEDSQEDITGYTYYSVSLSLGFLLLMAFIALTAYYCSKSRIRDERTGPSSGRTNSSFNSNRTVIMDRDPSSITIQIGEEQQQMQESILKSYPMLLFSQAKLHQKADDPTELLSCSICLADYADSEWLRLLPDCGHFFHRDCIDVWLRLNLSCPMCRNSPLPTPLAEVAPLAATRAY* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g1880 | 183 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 167 | IPR013083 | - | |
Ahy9g1880 | 183 | SUPERFAMILY | RING/U-box | 95 | 166 | - | - | |
Ahy9g1880 | 183 | PANTHER | ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN | 1 | 173 | - | - | |
Ahy9g1880 | 183 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 173 | IPR045899 | - | |
Ahy9g1880 | 183 | SMART | ring_2 | 121 | 162 | IPR001841 | - | |
Ahy9g1880 | 183 | Pfam | Ring finger domain | 120 | 163 | IPR001841 | - | |
Ahy9g1880 | 183 | CDD | RING-H2_PA-TM-RING | 121 | 163 | - | - | |
Ahy9g1880 | 183 | ProSiteProfiles | Zinc finger RING-type profile. | 121 | 163 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g1880 | Ahy-Chr9 | 104751683 | 104752682 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy9g1880 | 11 | 178 | C3H Transcription Factor Family | AT5G06490 | 34.831 | 1.58e-32 | 114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g1880 | - | - | adu:107466513 | 358.607 |