Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g1878 | ATGTCCAATAATTCCACTTCTCAATCAAAAGATGGTTTTGATGCTAGTGGTTTCACATATGGCGTAGCATTCATACTAGGTTTGATCTTCTTACTTGCTACCATAGCTTTCGCATGTTTCCGCATTCGCAGAATTCGAATTCCTAACATATTTAACATAGTAGCCGGTGTTCCTCCATCGTCACAATCTCATCAAACATTGGAACACCACGTGGATATTCGTATCGACACGAGTTATGAGAATTACCCTAAGATGCCATATTCCGATGAGGTAAAGAACAAAAATAATGTTGTGGGTGGATGCACCATATGCTTAGGAGACTATAAAGAGAGTGAGATGTTGAGGGTTCTTCCTGGTTGTGGCCATGCCTTTCACCAACCTTGTGTTGATCCATGGCTCATGTTGCACTCCACATGTCCCATATGCCGAAAATCATTGCCTACTCAAGCTCCATAG | 456 | 0.4189 | MSNNSTSQSKDGFDASGFTYGVAFILGLIFLLATIAFACFRIRRIRIPNIFNIVAGVPPSSQSHQTLEHHVDIRIDTSYENYPKMPYSDEVKNKNNVVGGCTICLGDYKESEMLRVLPGCGHAFHQPCVDPWLMLHSTCPICRKSLPTQAP* | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g1878 | 151 | PANTHER | RING-H2 FINGER PROTEIN ATL71-RELATED | 9 | 147 | - | - | |
Ahy9g1878 | 151 | Pfam | Ring finger domain | 101 | 143 | IPR001841 | - | |
Ahy9g1878 | 151 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 143 | IPR001841 | - | |
Ahy9g1878 | 151 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 61 | 149 | IPR013083 | - | |
Ahy9g1878 | 151 | SMART | ring_2 | 101 | 142 | IPR001841 | - | |
Ahy9g1878 | 151 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 9 | 147 | IPR045899 | - | |
Ahy9g1878 | 151 | CDD | RING-H2_PA-TM-RING | 101 | 143 | - | - | |
Ahy9g1878 | 151 | SUPERFAMILY | RING/U-box | 82 | 149 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g1878 | Ahy-Chr9 | 104678434 | 104679284 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy9g1878 | 17 | 150 | C3H Transcription Factor Family | AT5G06490 | 31.013 | 3.83e-24 | 91.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g1878 | - | - | adu:107466507 | 249.595 |