Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1799 ATGTATTGGGGAGGGAACATGGGAATGGGATGGGGTGTTATGATAGAAGAGGAAGTTGGAGGAGGAGGATGGAGGAAGGGTCCTTGGACTGCTGAGGAAGATAGATTGCTCATTGAATATGTCAAGATTCATGGCGAAGGTCGATGGAACTCTGTTGCTAGGCTTGCAGGACTGAAGAGGAATGGAAAGAGTTGCAGGCTGAGATGGGTGAATTACCTGAGACCAGACCTCAAGAGGGGTCAGATAACACCACAAGAAGAAAGCATCATTCTTGAACTCCATGCTAGATGGGGAAACAGGTGGTCGACAATTGCGAGAAGCTTGCCGGGAAGAACGGACAACGAGATCAAGAACTATTGGAGAACTCATTTCAAGAAAAAGGTTAAGAATCCATCTGACGCGGCCGAGAAGGCGAAAAGCCGCCTCTTGAGGCGGCAGCAATTTCAGCAGCAGCAACAGTTGAAGCAGCAGCAGCAGCAAATTCAACAACAGCAACAAGAAATTCAATTCAACTTGGACATGAAGGGGATCATGATGATGAACTTGCTTGAGATGGGAAATCATAATAATGACAATAGAAGAGTCCCTTCAATTTCTCAACAAGAGCCACAAGACATGTACCAACAACAAAGCTCAACAGAAGAAGAGCATGGATACTTCTACCACCCCATGTTCATCAATAACATTAATGGCAATAATAATGATAACTACTCACCAGCTGCAACAGAATCATCAAGTGACGAAATCTTGTGGGATGGACTTTGGAACTTGGATGATGTTCTTGGCAATTTCACTGCAGCCAGTGCTACGAGCAAGCCAACAACTTTAGTTGCTCCATTTTGCTAA 846 0.448 MYWGGNMGMGWGVMIEEEVGGGGWRKGPWTAEEDRLLIEYVKIHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKVKNPSDAAEKAKSRLLRRQQFQQQQQLKQQQQQIQQQQQEIQFNLDMKGIMMMNLLEMGNHNNDNRRVPSISQQEPQDMYQQQSSTEEEHGYFYHPMFINNINGNNNDNYSPAATESSSDEILWDGLWNLDDVLGNFTAASATSKPTTLVAPFC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1799 281 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Ahy9g1799 281 PANTHER MYB TRANSCRIPTION FACTOR 1 272 - -
Ahy9g1799 281 SMART sant 78 126 IPR001005 -
Ahy9g1799 281 SMART sant 25 75 IPR001005 -
Ahy9g1799 281 CDD SANT 28 73 IPR001005 -
Ahy9g1799 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Ahy9g1799 281 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Ahy9g1799 281 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Ahy9g1799 281 Pfam Myb-like DNA-binding domain 79 123 IPR001005 -
Ahy9g1799 281 CDD SANT 83 124 IPR001005 -
Ahy9g1799 281 Coils Coil 144 174 - -
Ahy9g1799 281 Gene3D - 83 128 - -
Ahy9g1799 281 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 272 IPR044676 GO:0003700|GO:0006355|GO:0043565
Ahy9g1799 281 ProSiteProfiles Myb-like domain profile. 25 73 IPR001005 -
Ahy9g1799 281 Gene3D - 26 78 - -
Ahy9g1799 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1799 Ahy-Chr9 102685741 102687475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1799 14 281 MYB Transcription Factor Family AT4G13480 53.237 2.52e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy9g1799 Myb_DNA-binding 1.10E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1799 K09422 - gmx:100782089 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2216 19 132950078 132951822 Ahy9g1799 9 102685741 102687475 hybridization