LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g1728	ATGGAACAAAAGAAATCTTCTATTGTTCTTGTTTTGAGAGAGTTCAAGCCGCACTTTCTGATGGTGTTAGCTCAAGTTGGCTATGCATTCTTGTATTTCATCACTGAAGCTTCCTTCAACCATGGGATGAGTCCTTTCTTGTATGTAACCTACCGCCATATCGTCGCGGCGGTTGTCATGTTCCCATTTGCATTCTTTCTAGAGAGAAATGAGAGACCAAAGCTCACATTTGCTATATTCATGGAAATTTTTGTGCTTTCCTTGGCTGGGATTAGTGTACCAATCAATATGTACTTTGCAAGCCTGCAGTACACTTCTCCAACCTTTGTTGCTTCCATTGTTAACGTCATAGCTTCCCTTACCTTCATCATTGCCGTAGTACTAAGGTATGAGACTCTTGATATTCGAGATCCCCGGGGAATAGCTAAAGTTATAGGGACAATGTTGTCCTTAAGCGGTGTAATGACAATGACACTGTACAAAGGACCTACCATGAGAAATTTGTGGCGTCCGGTAATTCATATTCCAGGAAAGAGTGCTGCTGCAGCACATGAGAACTGGCTCAAGGGTTCTCTTCTTGCAGTTATAAGCTGTGTTTCATGGTCTGTCTGGTATATCATGCAGGCAGCCACTTTGAAAAGATATCCAGCACAGTTGTCCCTTACTACATGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAGTCTTAATTATAGGGCATAAACCTTCAGCTTGGACTATAGGGTTCAACATTGACCTGTGGTCCACATTATATGGTGGAATTGTGATTGCTGGTTTGATAATATACATTCAGCTGTGGTGCACTGAGAAAAAGGGGCCAGTCTTCGTTACAATGACTACGCCCCTTTGTACCATACTTGCTGCAATTTTAGCATACTTTGTCTTTGGTGAGAAACTTTACCTCGGCAGCATCATAGGCGCAACTTTTGTCATCATTGGTCTATACTTGCTGTTGTGGGGTAAAGAAGGTGACCAAAAGATTCATATCAACACTAAACCGTGCAGTGGTGAAGATCCAGAATGCAGACTACAATCAGTACCTTAG	1074	0.4236	MEQKKSSIVLVLREFKPHFLMVLAQVGYAFLYFITEASFNHGMSPFLYVTYRHIVAAVVMFPFAFFLERNERPKLTFAIFMEIFVLSLAGISVPINMYFASLQYTSPTFVASIVNVIASLTFIIAVVLRYETLDIRDPRGIAKVIGTMLSLSGVMTMTLYKGPTMRNLWRPVIHIPGKSAAAAHENWLKGSLLAVISCVSWSVWYIMQAATLKRYPAQLSLTTWMCFVGAAQSAVFTVLIIGHKPSAWTIGFNIDLWSTLYGGIVIAGLIIYIQLWCTEKKGPVFVTMTTPLCTILAAILAYFVFGEKLYLGSIIGATFVIIGLYLLLWGKEGDQKIHINTKPCSGEDPECRLQSVP*	358

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy9g1728	357	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	51	161	-	-
Ahy9g1728	357	PANTHER	WAT1-RELATED PROTEIN	15	345	-	-
Ahy9g1728	357	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	255	331	-	-
Ahy9g1728	357	Pfam	EamA-like transporter family	189	328	IPR000620	GO:0016020\|GO:0016021
Ahy9g1728	357	Pfam	EamA-like transporter family	17	156	IPR000620	GO:0016020\|GO:0016021
Ahy9g1728	357	PANTHER	WAT1-RELATED PROTEIN	15	345	IPR030184	GO:0016021\|GO:0022857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g1728	Ahy-Chr9	97907425	97913281	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g1728	3	352	Nodulin-like Gene Family	AT5G07050	39.726	1.27e-92	281

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g1728	-		-	gmx:100527877	563.148

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy19g2135	19	128310581	128316252	Ahy9g1728	9	97907425	97913281	hybridization

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