Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1723 ATGTCCCATTTCCGGAAATTCCAATTAACACACTTCATCTCCAAAATTTCCCATACTTGCCTTAAACCCTCACAAAATCCTAGATTCCACAGCGTCAAATCTGCACCCGAATCCGCACAAAAAAACTGTGATTTCAAGTTCCCCTCGAAGGTCAGAAGGGAAGCACAAGCCGCATTGCTCGAGTACCTTCATTCCACGAGGAGCTTGCAGTTCCTTGATGCAGACAACATGTGCAAAAACTCGCCCTTTTTCCTCGACGATATTTTGAGGAAGGTTCTTCAGAAGAAGATCGACACTGCTGCCAGCGATGTCAGGAAATCAATCTCACGTTACCTCCGTTACCACCCAATTAACGAGTTTGAACCATTCTTCGAGAGTACAGGTTTGAAGCCTTTTGAATACTTGCACCTTCTTCCAAGGGACATGATGTTCATCAATGATGACACTGTGTTGATGGAGAATTACCATACTCTGTGTAACTATGGTGTTCCCAGGAACAAAATGGGGAAGATCTTCAAGGATTCACCTCAAGTTTTTCGATATGAAAGTGGGGTTCTGGTGTCCAAGTTTCAGAGTTATGAAGAGCTTCGTGTTGCTTCTTCAACTTTGGTAAAGGTGATTTCTTTGAACCCTAGGGTTTTGGTTGGGGATGTTGACCTTTACCTTGTGAAGGTTTTGGAGAAGTTAAACCGTCTTGTTGGTGAAGAAAAGGGTAGTACTTGGATTGAGGAGCAGTTGTTGGATGAGAGTAGCTGTAATTTTGGGGTTATGCATGAGCTCTTGTGCTTGCTTGAGAAGGTTTACAGTGACGAAAAATTGTTGGGTGAGATGATTGGCCAGCACCCTTTTGTTGTTTTTGAGGATTCTGGAGTTTGGACATTGTCCCTCATTGGGTTCTTGGTGAAATTAGGGTTGTCCTTGGACCAGATAGCTATAATTTTTGTCGAGTTTCCACAAATTGGGGTGTTGATGTTTCTGTCGAATTTGCACAAGTGTTTGACGTTCCTGTCTGATATCGATATGCATGCTGCAGAGATTGGGAAGATTTTACAGTCTCATTCCTTGCTGATGGGTTCATTCACTATTAAGAAAAGTAGTAGTTTGCTCAGTAGCTTGAATGTTGGCAAGAAAAGGCTCTGTAAGTTAGTGCAGGATAATCCGGAAGGGATGCAGAATTGGGCTGTGGGGAAGAAAATTCAGCCTTATCCTGAGGATAAGGAAACAAGGGCTCTGAAAACAGAGTTCTTGAAAACAAAGTTCTTGTTGAGCCTTGGATACGAAGAGAACTCGGGGGAAATAAAACAGGCTTTTAAGCTGTTCAGAGGTAAGGGAGATGAGCTTCAGGAGAGATTCGATTTTATTGTTAATGCTGGCTTGGACGTTAAGGATGTTCGCGAAATGATTAAGGCTTCACCTCAGATTCTTAATCAGACCACAGATATGATCAACATGAAAATTGAGTATCTTGTGAATGAAGGATATCCTATATCAAATTTAGTCAATTTCCCATCTTTTCTCTCCTATACACTTTGTAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTTAGAGACCATAGAGTTGTTCACCCGAGGCTTGCTTTGAGCACTATAGTTGCATGCTCAGAGGAATTATTCTTACGGTTGTATGTAAATCAGCATCCATCTGGCTTTCAAGTTTGGCAAGATTTGAAGTCTGAAATTTATTCTGAGAGATAA 1719 0.4148 MSHFRKFQLTHFISKISHTCLKPSQNPRFHSVKSAPESAQKNCDFKFPSKVRREAQAALLEYLHSTRSLQFLDADNMCKNSPFFLDDILRKVLQKKIDTAASDVRKSISRYLRYHPINEFEPFFESTGLKPFEYLHLLPRDMMFINDDTVLMENYHTLCNYGVPRNKMGKIFKDSPQVFRYESGVLVSKFQSYEELRVASSTLVKVISLNPRVLVGDVDLYLVKVLEKLNRLVGEEKGSTWIEEQLLDESSCNFGVMHELLCLLEKVYSDEKLLGEMIGQHPFVVFEDSGVWTLSLIGFLVKLGLSLDQIAIIFVEFPQIGVLMFLSNLHKCLTFLSDIDMHAAEIGKILQSHSLLMGSFTIKKSSSLLSSLNVGKKRLCKLVQDNPEGMQNWAVGKKIQPYPEDKETRALKTEFLKTKFLLSLGYEENSGEIKQAFKLFRGKGDELQERFDFIVNAGLDVKDVREMIKASPQILNQTTDMINMKIEYLVNEGYPISNLVNFPSFLSYTLCRVKLRLSMYNWLRDHRVVHPRLALSTIVACSEELFLRLYVNQHPSGFQVWQDLKSEIYSER* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1723 572 SMART mt_12 465 495 IPR003690 GO:0003690|GO:0006355
Ahy9g1723 572 SMART mt_12 169 199 IPR003690 GO:0003690|GO:0006355
Ahy9g1723 572 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Ahy9g1723 572 PANTHER CGI-12 PROTEIN-RELATED 38 565 IPR003690 GO:0003690|GO:0006355
Ahy9g1723 572 Pfam mTERF 158 320 IPR003690 GO:0003690|GO:0006355
Ahy9g1723 572 Pfam mTERF 412 546 IPR003690 GO:0003690|GO:0006355
Ahy9g1723 572 Pfam mTERF 264 401 IPR003690 GO:0003690|GO:0006355
Ahy9g1723 572 Gene3D Transcription termination factor 3, mitochondrial 91 290 IPR038538 -
Ahy9g1723 572 Gene3D Transcription termination factor 3, mitochondrial 291 564 IPR038538 -
Ahy9g1723 572 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 38 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1723 Ahy-Chr9 97758625 97768018 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy9g1723 mTERF 8.70E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1723 - - lja:Lj1g3v4317450.1 630.172