Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1722 ATGCAAAACCAAAGCAAAGCAAAACAAACAAAACACATAACCATGAATGAAGATGGATCAAAGGGTAGGACAAAGGATGACGGCGGAGATGTCCGATATAGAGGCGTACGCCGCCGTCCTTGGGGGAAGTTTGCGGCCGAGATTCGTGACTCCACTAGGCAGGGTCAGAGGGTTTGGCTTGGGACATTCAACACGGCTGAGGAAGCAGCTAGGGCTTATGATAGAGCCGCTTATGCCATGAGAGGTGCATTTGCTATCCTTAACTTCCCAAATGAGTATCCTATGTCCGGTTATGGTAATAACCGCACCGGTGGCGGTGGCAGTGGCTCCTCTTATTCCTCCGGCGCTTCAACGTCCTCTGCTTCATGGCAGGGCAATGTGGAAGGCAGGGAAAGGAGTGAAGTGTTTGAGTTTGAGTACTTGGATGACAAATTGTTGGAGGAGCTTCTTGCATGCGAAGAAAAGAAGAAAAATGGACCATGA 483 0.4948 MQNQSKAKQTKHITMNEDGSKGRTKDDGGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGAFAILNFPNEYPMSGYGNNRTGGGGSGSSYSSGASTSSASWQGNVEGRERSEVFEFEYLDDKLLEELLACEEKKKNGP* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1722 160 MobiDBLite consensus disorder prediction 11 34 - -
Ahy9g1722 160 MobiDBLite consensus disorder prediction 96 127 - -
Ahy9g1722 160 PANTHER BNAA01G23960D PROTEIN 21 154 - -
Ahy9g1722 160 CDD AP2 32 91 IPR001471 GO:0003700|GO:0006355
Ahy9g1722 160 SMART rav1_2 32 96 IPR001471 GO:0003700|GO:0006355
Ahy9g1722 160 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Ahy9g1722 160 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Ahy9g1722 160 ProSiteProfiles AP2/ERF domain profile. 32 90 IPR001471 GO:0003700|GO:0006355
Ahy9g1722 160 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Ahy9g1722 160 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Ahy9g1722 160 MobiDBLite consensus disorder prediction 96 128 - -
Ahy9g1722 160 Pfam AP2 domain 32 82 IPR001471 GO:0003700|GO:0006355
Ahy9g1722 160 PANTHER DNA-BINDING DOMAIN 21 154 IPR044808 GO:0003700|GO:0009873
Ahy9g1722 160 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1722 Ahy-Chr9 97646382 97646991 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1722 27 157 AP2-EREBP Transcription Factor Family AT3G23230 59.848 1.08e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy9g1722 AP2 6.90E-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1722 - - adu:107466315 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2120 19 127675398 127675930 Ahy9g1722 9 97646382 97646991 hybridization