Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1717 ATGGATTCCACTTCTCACTTCTTCAACTCTCCCACCTCCGATAACTCCTCCTCCTCCTCTTTCGGCTCCTTTAGCAACTCCTCAGAGTCATTCTCGTGGAATGGGTACCTTCCATTCAACGAGAACGACCCTGAAGAGATGCTCCTCTATGGCATGATTGCCACCGCTGACACCCCTCGCCACGGTCCCCTGGAGAGGGTAAAGGAGGAGGAGGTTAGCTCAGAGGAAAATGGTGGCGATTGTGCCGCAACAGAAAGGAAGGAGAAGTCGTACAGAGGTGTCAGGAGAAGACCGTGGGGTAAGTTTGCGGCCGAGATAAGAGACTCAACTCGGCACGGCATAAGGGTGTGGTTGGGGACATTCGACAGTGCGGAAGCAGCGGCTATGGCTTATGATCAAGCCGCTTTTTCGATGAGGGGAACGGCAGCGATCCTTAATTTCCCGGTGGAGACGGTGAAGCAGTCGCTTAGGGAGATGAACTATGGTGGTGATGGAGAAGAAGGGTGCTCCCCTGTTGTAGCCTTGAAGAGGAAGCACTCATTGAGGAGGAAAATTGGTATTAAGAAGAACAACAATGTTAAGGACAGGGACAATGTTGACGATAATCTTAGGTTAGATAATGCAGTGGTGTTTGAGGATCTTGGTGCTGATTACTTGGAACAATTGTTGATGTCGTCTGATCAGATTCCTAATCCTTGGTGA 702 0.5014 MDSTSHFFNSPTSDNSSSSSFGSFSNSSESFSWNGYLPFNENDPEEMLLYGMIATADTPRHGPLERVKEEEVSSEENGGDCAATERKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAAMAYDQAAFSMRGTAAILNFPVETVKQSLREMNYGGDGEEGCSPVVALKRKHSLRRKIGIKKNNNVKDRDNVDDNLRLDNAVVFEDLGADYLEQLLMSSDQIPNPW* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1717 233 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Ahy9g1717 233 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Ahy9g1717 233 CDD AP2 89 149 IPR001471 GO:0003700|GO:0006355
Ahy9g1717 233 MobiDBLite consensus disorder prediction 61 86 - -
Ahy9g1717 233 SMART rav1_2 90 154 IPR001471 GO:0003700|GO:0006355
Ahy9g1717 233 Gene3D AP2/ERF domain 89 150 IPR036955 GO:0003700|GO:0006355
Ahy9g1717 233 ProSiteProfiles AP2/ERF domain profile. 90 148 IPR001471 GO:0003700|GO:0006355
Ahy9g1717 233 PANTHER DNA-BINDING DOMAIN 32 225 IPR044808 GO:0003700|GO:0009873
Ahy9g1717 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 32 225 - -
Ahy9g1717 233 Pfam AP2 domain 90 140 IPR001471 GO:0003700|GO:0006355
Ahy9g1717 233 SUPERFAMILY DNA-binding domain 90 150 IPR016177 GO:0003677
Ahy9g1717 233 MobiDBLite consensus disorder prediction 59 86 - -
Ahy9g1717 233 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1717 Ahy-Chr9 97215281 97216401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1717 37 227 AP2-EREBP Transcription Factor Family AT3G23240 58.639 2.32e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy9g1717 AP2 1.10E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1717 K14516 - gmx:100804481 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2117 19 127144365 127145440 Ahy9g1717 9 97215281 97216401 hybridization