Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1709 ATGGAACGTGGGGTTGTGGATGGCATTATCAACAGGCTTCTAGAAGTAAGAGGCAAACCGGGGAAGCAAGTGCAGCTCTCTGAGGCTGAGATCAGGCAGCTATGCCTTGTCTCCAAGGACATCTTCTTGAGACAACCTAACCTTTTGGAACTTGATGCACCAATCAAGATCTGTGGGGATATCCATGGTCAATATTATGATCTTCTGAGAATCTTTGAAAATGGTGGATTCCCACCTCGTTCCAATTACTTGTTCTTAGGAGACTACGTTGATCGCGGAAACCAAAGTCTTGAGACAATATCTCTTCTTCTAGCATACAAAATCAAATACCCTCAGAACATTTTCCTCCTCAGGGGAAACCATGAATGCGCTTCCATAAACCGTATCTACGGTTTCTACGACGAATGCAAGAGAAGATACAGTGTGAAGCTGTGGAAAACATTCACGGATTGCTTCAACTGCTTGCCCGTGGCGGCTCTTATCGACGACAAGATACTCTGCATGCATGGTGGACTCTCCCCTGAATTGCACAACTTGAACCGGATAAGGACTTTGCGCCGTCCGGTCCAAGTGCCCGACAGTGGTCTGCTATGTGATCTTCTCTGGTCTGATCCCTGCGGAGACATTCAAGGCTGGGGAGGAAGCGAACGCGGAGTTTCGTGTACTTTCGGCCCTGATAGGGTCACTGAGTTTCTGAGGAAGCATGATCTTGATTTGATCTGTAGAGCACATCAGGTGGTGGAAGATGGATATGAATTCTTTGCTAATAGGCAACTTGTAACAATCTTCTCTGCACCAAATTACTGTGGGGAATTTGACAATGCTGGTGCTATGATGAGTGTTGATGAGACACTTGTGTGTTCTTTCCAAATATTGAAGCCTCTAGAGAATCAAAAGCTGCAGCAGCTTTATAAGTTTGGTTATGGAAGCACAACTACACAAGCATTTCTTGGTGCAAACGCATGA 966 0.4565 MERGVVDGIINRLLEVRGKPGKQVQLSEAEIRQLCLVSKDIFLRQPNLLELDAPIKICGDIHGQYYDLLRIFENGGFPPRSNYLFLGDYVDRGNQSLETISLLLAYKIKYPQNIFLLRGNHECASINRIYGFYDECKRRYSVKLWKTFTDCFNCLPVAALIDDKILCMHGGLSPELHNLNRIRTLRRPVQVPDSGLLCDLLWSDPCGDIQGWGGSERGVSCTFGPDRVTEFLRKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLVCSFQILKPLENQKLQQLYKFGYGSTTTQAFLGANA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1709 321 SUPERFAMILY Metallo-dependent phosphatases 19 299 IPR029052 -
Ahy9g1709 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Ahy9g1709 321 Gene3D - 2 305 IPR029052 -
Ahy9g1709 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 313 - -
Ahy9g1709 321 Pfam Serine-threonine protein phosphatase N-terminal domain 6 51 IPR031675 -
Ahy9g1709 321 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Ahy9g1709 321 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Ahy9g1709 321 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Ahy9g1709 321 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Ahy9g1709 321 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Ahy9g1709 321 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Ahy9g1709 321 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Ahy9g1709 321 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Ahy9g1709 321 SMART pp2a_7 26 296 IPR006186 GO:0016787
Ahy9g1709 321 CDD MPP_PP1_PPKL 5 294 - -
Ahy9g1709 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1709 Ahy-Chr9 96806369 96808566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1709 33 242 Calmodulin-binding Proteins AT5G63870 32.000 5.26e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1709 K06269 - gmx:100791655 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2115 19 126782011 126784155 Ahy9g1709 9 96806369 96808566 hybridization