Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1680 ATGAAGAATTCATCAGAAGTTGAAGAAGAAGAGGAAGCACAAGATCATCATGATGGAACCAAAAAGTCTTATGATTGCACATTCTGCAGGAGAGGCTTCACAAATGCTCAAGCTTTAGGGGGTCACATGAATATTCATAGAAGAGATAGGGCCAAGAACAAGCCTCATCTTCTTCATCACTCACCAAATTCCTCAAACAATAATCATCAAGAGGGAGAATTCATGTCCCTAAAATTCTCATCATCATCAACCCATGCTTTCGATTCTCAAAGGACCTATGACAACATGTATTTTCATCCACCTCCACCACCACCACCTAACGATTATCAAGTTAGGAACCATCAGCAACATGAACCACCATTTCAATTAGATCAATTTCATCATCAGCCTATGATGAATCTCAAGAATCAAGAGCTTCAAGGTGCCAATTTGAGTCTACAAATTTGCCCTACTAGTGATGATCAACATGTTATTAGAAGAAGAATTCACCAGCAAGATAGTGATGAAGTGGACTTGGAACTCAGACTCGGCCACCATCATCCATAA 546 0.3974 MKNSSEVEEEEEAQDHHDGTKKSYDCTFCRRGFTNAQALGGHMNIHRRDRAKNKPHLLHHSPNSSNNNHQEGEFMSLKFSSSSTHAFDSQRTYDNMYFHPPPPPPPNDYQVRNHQQHEPPFQLDQFHHQPMMNLKNQELQGANLSLQICPTSDDQHVIRRRIHQQDSDEVDLELRLGHHHP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1680 181 MobiDBLite consensus disorder prediction 1 24 - -
Ahy9g1680 181 Gene3D Classic Zinc Finger 3 85 - -
Ahy9g1680 181 SUPERFAMILY beta-beta-alpha zinc fingers 21 50 IPR036236 -
Ahy9g1680 181 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Ahy9g1680 181 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 2 179 - -
Ahy9g1680 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Ahy9g1680 181 PANTHER OS07G0101800 PROTEIN 2 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1680 Ahy-Chr9 94663893 94664438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1680 4 181 C2H2 Transcription Factor Family AT4G17810 30.601 1.73e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy9g1680 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1680 - - aip:107615854 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2072 19 124430363 124430917 Ahy9g1680 9 94663893 94664438 hybridization