Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1674 ATGAGAGTTATTAGGAATTGGATTGTAAGTAAGAAGAGAAAGTTTCTTGGGATTGAGGAGAGATTGGAGAAGATGATCAATTGCATGCGTTCTGGGGAACAGGTTGCTGTTGATGAGATTGGTGGTTATTCATCAGAGTCACTTGCAACAAGGGACTATTCAGCTACAGCGAGTGGCTATTCATCTAGGCCTGGTGCTGCTGAATTTGATCCAAAGTTGGATAATAGCAACATTGAAGAAGCAGAGTCCACACTTCGTGAAAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTTTACTAGGAAGGCTTGAATATCAGAAGGGTAATTTTGAAGCTGCACTTCATGTATTTGAAGGAATAGACATTGCTGCTGTTGCTCCAAAGATGAAAATTTCTATATCTAGAAGATGTGAACGGAATATGAATAGACGCCGTTCGTTGAGTGATGCAGCGCCTCCTATGTCCATTCATGCTGTTAGTCTACTTCTTGAAGCTGTTTTGCTCAAGGCAAAGTCATTGCAGATTCTTGGAAGGTTTCAAGAAGCTGCTAGATCATGCAAGACTATTTTGGACACTGTTGAATCTGCATTACCTGAAGGATGGCCTGAGAACTTTGATTTAGACAGAAAGTTACAAGAGACTATAAGAAATGCTGTAGAACTACTTCCAGAGCTATGGAACCTTGCCGGCTCTCATCAACATGTCATATCATCATTTAGGAGGGCCTTGCTTTATCCATGGAATCTTGACATTGAAACAACTTCAAGAATTCAAAAGGAATTTGCTATGTTTCTTCTGTATAGCGGCTGTGAAGCGAGTCCTCCTTCGCTTCGCTCTCAATTGGACGGTTCCTTTGTCCCAAGAAACAATATAGAAGAAGCTGTTCTCTTGCTTCTTATTCTGCTGAGAAATTCTGCTATAGGAAGCATTGAATGGGACCCTTCAGTAGTTGATCATCTTTCTTTTGCTCTAACTGTTTCCGGGGAGTTCAAGACACTGGCTCAACAGGTTGAGGAATTGCTTCCGGAAACCATGGAGAGGAAAGAAAGACATTATATTCTAGCACTTTGTTACTTTGGTGAAGGTGAGCACATGATTGCTTTGGATCTTTTGAGGAACTCTTTGAATGATAGAGAGAACTCGGAGTGCGAACAGGAGCTGCTTCTAGCTTCAAAAATTTGTGCAGATAACATGGTTTGTGTTGAGGATGGAATCAAATATTCTTGCAAAGCAATTTCTCAGTTGGATGGAAAGTGCATGCAAGTGGTAGCAATTGCATATTGCTTACTAGGTGTTCTGCTCTCATCGAAATCAAGGTTGATAGCTTCTGATTCAGAGAAAGTTTTAATGCAATCCGAAGCACTGAGGGCTCTGAAAACGGCAGAGAGAACGATGAGTGAGAGTGATCCTTACATAGTCCTTCATCTTTGTCTAGAATACGCCGAGCAGCGGAACTTGAGCATTGCTTTTTGTCATGCAAAGGAACTGGTTAAGCTTGAGGGTGGATCTAGTGTTGCTGCATATGTATTACTTGCAAGGATTTTATCAGCTCAAAAGAATTTTGTGGATGCAGAGTTGGTTATTGATGCTGCCATAGATCAAAGTGGGAAATGGGATCAAGGAGAGTTGTTGAGAACCAAAGCGAAACTCCGGATTGCACAGGGAAGATTAAGGAGTGCAGTGGAGACATATACTTTCCTCCTTGCTGTGCTTCAAGTCCAAAACAAAAGTTTGGGCACTGCAAATAAGGTTATGAAGAGTAAGAGAAACCGCAACAGAAATCTGGAGATGGAAATATGGCATGATTTGGCCAACTTGTACATTGCTTTATCACAGTGGCGAGATGCTGAAGTTTGTCTTGCAAAGTCTAAGGCTATTAATCCTTATTCTGCTTCTAGATGGCACTCCACAGGTTTACTTTTCAAGGCCAGAGATCAGCAGCAAGAAGCATTGAATGCATTTAGGAAAGCACTAGACATCGAACCAAACCATGTGCCAAGTTTGATATCAACAGCATGTGTTCTGAGACAGCTTGGTGGCCAATCATCTTCAATTGTGAGAAGCCTTCTGAGTGATGCACTAAGGCTTGACAGAACAAACCCAAATGCTTGGTACAATCTTGGACTGCTCTACAAACATGATTTGGGCACATCTACATTGGAAGCTGCTGAGTGCTTTGAGGCTGCTGCTCATCTTGAAGAAACTTCTCCCATTGAACCCTTTAGATAG 2229 0.4181 MRVIRNWIVSKKRKFLGIEERLEKMINCMRSGEQVAVDEIGGYSSESLATRDYSATASGYSSRPGAAEFDPKLDNSNIEEAESTLRESGYLNYEEARALLGRLEYQKGNFEAALHVFEGIDIAAVAPKMKISISRRCERNMNRRRSLSDAAPPMSIHAVSLLLEAVLLKAKSLQILGRFQEAARSCKTILDTVESALPEGWPENFDLDRKLQETIRNAVELLPELWNLAGSHQHVISSFRRALLYPWNLDIETTSRIQKEFAMFLLYSGCEASPPSLRSQLDGSFVPRNNIEEAVLLLLILLRNSAIGSIEWDPSVVDHLSFALTVSGEFKTLAQQVEELLPETMERKERHYILALCYFGEGEHMIALDLLRNSLNDRENSECEQELLLASKICADNMVCVEDGIKYSCKAISQLDGKCMQVVAIAYCLLGVLLSSKSRLIASDSEKVLMQSEALRALKTAERTMSESDPYIVLHLCLEYAEQRNLSIAFCHAKELVKLEGGSSVAAYVLLARILSAQKNFVDAELVIDAAIDQSGKWDQGELLRTKAKLRIAQGRLRSAVETYTFLLAVLQVQNKSLGTANKVMKSKRNRNRNLEMEIWHDLANLYIALSQWRDAEVCLAKSKAINPYSASRWHSTGLLFKARDQQQEALNAFRKALDIEPNHVPSLISTACVLRQLGGQSSSIVRSLLSDALRLDRTNPNAWYNLGLLYKHDLGTSTLEAAECFEAAAHLEETSPIEPFR* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1674 742 Gene3D Tetratricopeptide repeat domain 580 737 IPR011990 GO:0005515
Ahy9g1674 742 SUPERFAMILY TPR-like 543 712 IPR011990 GO:0005515
Ahy9g1674 742 ProSiteProfiles TPR repeat profile. 631 664 IPR019734 GO:0005515
Ahy9g1674 742 PANTHER PROTEIN NPG1 17 742 IPR043376 -
Ahy9g1674 742 PANTHER OS10G0471400 PROTEIN 17 742 - -
Ahy9g1674 742 SUPERFAMILY TPR-like 349 569 IPR011990 GO:0005515
Ahy9g1674 742 Gene3D Tetratricopeptide repeat domain 66 579 IPR011990 GO:0005515
Ahy9g1674 742 SMART tpr_5 505 538 IPR019734 GO:0005515
Ahy9g1674 742 SMART tpr_5 597 630 IPR019734 GO:0005515
Ahy9g1674 742 SMART tpr_5 631 664 IPR019734 GO:0005515
Ahy9g1674 742 SMART tpr_5 701 736 IPR019734 GO:0005515
Ahy9g1674 742 SMART tpr_5 163 196 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1674 Ahy-Chr9 94098936 94103841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1674 26 742 Calmodulin-binding Proteins AT4G28600 52.198 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1674 K21843 - gmx:100789469 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2063 19 123922878 123927852 Ahy9g1674 9 94098936 94103841 hybridization