Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1653 ATGGATGTGAAGGAAACTGGGGAGTTGGTGTCTTTGGACCCAGAGATGTTGCAGCTTCAGGAGGTTTCTTCTTTTGCACTGAAATCGAATCCTGGTGTTGCTGAGGAGCTATTCTCACAGTGGCTTTCGCTTCCTGATACTTGCCGCCTGGTCAAGTCATTGATAGATGATGCAAAGGCAGGAGCTTTGTCATGTGCACTTGAGAACTCACCAACCGCAAATGCTCTGGCAGGCAATTCAGTACCTTCGTTGTTTCCAGCTGGTACGACACCGCCGCTTTCACCACGAAGTTCAGCTGGTTCCCCACGTACTATGAAACAGAGAACTAGTCCTTCTTCATTAAGTTCTCCACTCAAAGTAGTCAGCGAGCCAGTACGGGAGATCATTCCACAGTTCTACTTCAAAAATGGTCGTCCTCCTCCGGATGACATGAAAGAGCATTTCCTATTTCAAATTGACAATCGATTTGTTGGTCATGTGGATGGTCTGCAGTTACATGAATTTAAGTCTATTACGAAAGAGATTTGCAAACTTCCGTCATTCTTCTCTGCTGCTCTCTTCAGAAAGATTGATGTCAATTATGCTGGAGCAGTAACAAGGGAACAATTTATTGACTATTGGGTTCGAGGCAATATGTTGGCTATGGATTTAGCTACACAAATATATACCATACTGAAGCAACCTTACCGGACATACCTAGTGCAGGATGATTTCAAACCTGTCTTGAGGGAGTTATTGTCCACTCATCCTGGGTTGGAGTTTTTGCAAAGCACACCTGAATTTCAGGAAAGATATGCTGAGACTGTGATACATAGAATATTTTACTACATGAATAGATCGGGCAATGGCCGACTTACACTACGGGAGTTGAAACGTGGGAACCTCATTGATGCCATGCTGCATGTTGATGAGGAAGAGGATATAAACAAAGTTCTGAGGTACTTCTCATATGAGCATTTTTATGTCATTTACTGCAAATTTTGGGAGCTCGACACAGATCATGACTTTTTCATTGATAGAGAGAACCTTATTAAATATGGGAACCATTCTCTTACATATCGGATTGTTGATAGAATATTTTCTCAGGTTCCACGGAAATTTACCAGCAAAGTTGAAGGGAAGATGAACTATGAAGATTTTGTCTATTTCATACTTGCAGAGGAAGATAAGTCGTCTGAACCTAGTCTAGAATACTGGTTCAGATGCATTGATTTGGATGGGAATGGAGTGCTGACACCAAACGAAATGCTGTTCTTTTATGAGGAGCAGTTGCATCGGATGGAGTGCATGGCCCAAGAGCCAGTGCTTTTTGAAGATATATTATGTCAGATTGTTGATATGATTGGACCAGAGCAGAATGAGGGATTTATTACATTGCGAGATGTTAAAGGCAGCAAACTTTCTGGCAACGTTTTCAATATTCTTTTCAATCTGAACAAATTCATTGCTTTTGAGACCCGTGATCCGTTTCTTATACGTCAGGAGCGTGAGGATCCAAGTATGACAGAGTGGGATCGTTTTGCGCATAGAGAATATATTAGGCTTTCTATGGAAGAAGACGGCGAAGATATGTCGAATGCCAGTGGGGATGTGTGGGAAGAATCTCTAGAGGCTCCATTCTGA 1623 0.4221 MDVKETGELVSLDPEMLQLQEVSSFALKSNPGVAEELFSQWLSLPDTCRLVKSLIDDAKAGALSCALENSPTANALAGNSVPSLFPAGTTPPLSPRSSAGSPRTMKQRTSPSSLSSPLKVVSEPVREIIPQFYFKNGRPPPDDMKEHFLFQIDNRFVGHVDGLQLHEFKSITKEICKLPSFFSAALFRKIDVNYAGAVTREQFIDYWVRGNMLAMDLATQIYTILKQPYRTYLVQDDFKPVLRELLSTHPGLEFLQSTPEFQERYAETVIHRIFYYMNRSGNGRLTLRELKRGNLIDAMLHVDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIKYGNHSLTYRIVDRIFSQVPRKFTSKVEGKMNYEDFVYFILAEEDKSSEPSLEYWFRCIDLDGNGVLTPNEMLFFYEEQLHRMECMAQEPVLFEDILCQIVDMIGPEQNEGFITLRDVKGSKLSGNVFNILFNLNKFIAFETRDPFLIRQEREDPSMTEWDRFAHREYIRLSMEEDGEDMSNASGDVWEESLEAPF* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1653 540 SUPERFAMILY EF-hand 304 460 IPR011992 -
Ahy9g1653 540 Gene3D - 125 226 - -
Ahy9g1653 540 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 3 540 - -
Ahy9g1653 540 PANTHER PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED 3 540 - -
Ahy9g1653 540 MobiDBLite consensus disorder prediction 520 540 - -
Ahy9g1653 540 Pfam EF-hand domain pair 320 420 IPR002048 GO:0005509
Ahy9g1653 540 Gene3D - 315 487 - -
Ahy9g1653 540 Pfam EF-hand domain 216 305 IPR041534 -
Ahy9g1653 540 MobiDBLite consensus disorder prediction 86 117 - -
Ahy9g1653 540 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Ahy9g1653 540 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Ahy9g1653 540 SUPERFAMILY EF-hand 163 293 IPR011992 -
Ahy9g1653 540 Gene3D - 227 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1653 Ahy-Chr9 92189347 92196989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1653 7 540 EF-hand Containing Proteins AT5G28850 73.832 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1653 K11583 - gmx:100804366 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2463 19 141806938 141808772 Ahy9g1653 9 92189347 92196989 hybridization
Ahy19g2037 19 122148406 122156154 Ahy9g1653 9 92189347 92196989 hybridization