Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1621 ATGACGGGGCAAGCGGTGAAGCTGAATAGAGCCAAGCTTGAGGCATGCTTAACATGTCCTTTGTGCAATAAATTGTTCAACAATGCCACCACCATTTCAGAATGCTTACACACTTTTTGCAGGGGATGCATAGATAAGAAGCTAATAGATGAGCAACTAAAGCACTGTCCAGTATGCAATGCTGACTTGGGTTGTTCTCCACTTGATAAATTAAGGACAGATCATAGTTTACAAGGTTTGAGGAACAAAATTTTGCCTGAAGAAGGAAAAAGAATTGCCAAGACACCTAAGAATTGTGTGAAAAGAAAGAAGAAATCTCTGTCTTCTCTAGAAGCCAACGCAACAGAAGCAAAAGCTGCTACTCCTGAGAGAGAAGTTTCCGCGCCTTCGCAACCGGATTGTTCTTCTCCTAAACCTGAAAAGGTGGAGGAAGATGTCAGGAAAGACGAGAAACAACCGCGGAGGATAGGAATCTTGGATGAAGTCTCTACAAAGTTAACTGCAAGAAGAGCTAAAGTTGTAGCAAGAAAAAAGTACCTTCTGAAAGAGTTAACATCATCTTGTGAACCGGATAAAGTAACCGGAGATCAGAGGAAAGAAAATGATGACCGGTTTCAGCTTGAAATTTCCAATGACAGTTCCAAAGCCAGAGTTCCGAATCCTTCAAAACCAGATTCAAGTCAACAAATAGTGCCAAACAAGATTCCAATTGACAATGTTGAATCATGGCAAGAAGCTCTTGATTTGTGTGAGCCATTAAATTCCATTGTAGAAGCTGCAAGGAAGAACAAATCTTGCAGTAAGTCCACTATGCAAGAACATGCTGTCATTCCATCAGTAAAGTCAAGTGACAATGATGGCCAGCCTAAGGTTGAAAATGGTGATGAGAATGAATCGAATCGTTCGAGATCATCCGATACAAAAGGAAGAAAACTCAAATTCTCTGAGGACTTGAATGTTCCAGTACAGCAGCCTGTGATTACTTCAAATGGTGAAAGCAACAGAGGGTTTGGTCCAGTTTGGTTCTCCTTGGTTGCTTCTGAAGTGAAGGAAGAAAGTGCAAAATTGCCAAAAATAACCCCCAGCTACTTAAGGGTCAAGGATGGTAGTTTACTTGTTTCCCATATCAAAATGTATATAGTGAAGAAGCTTGGTCTTGTTAGCGAATCCGAGGTGGAGATCTCGTTGCAAGGTAAACCGGTTCTACCTTGCATGCAACTGCAAAACTTGGTAGAGTTGTGGCTGCAAACAAAGCCATTGAATGAGAAGATTCAAACACATGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCATATCATCGAAAGTCTTGA 1338 0.4111 MTGQAVKLNRAKLEACLTCPLCNKLFNNATTISECLHTFCRGCIDKKLIDEQLKHCPVCNADLGCSPLDKLRTDHSLQGLRNKILPEEGKRIAKTPKNCVKRKKKSLSSLEANATEAKAATPEREVSAPSQPDCSSPKPEKVEEDVRKDEKQPRRIGILDEVSTKLTARRAKVVARKKYLLKELTSSCEPDKVTGDQRKENDDRFQLEISNDSSKARVPNPSKPDSSQQIVPNKIPIDNVESWQEALDLCEPLNSIVEAARKNKSCSKSTMQEHAVIPSVKSSDNDGQPKVENGDENESNRSRSSDTKGRKLKFSEDLNVPVQQPVITSNGESNRGFGPVWFSLVASEVKEESAKLPKITPSYLRVKDGSLLVSHIKMYIVKKLGLVSESEVEISLQGKPVLPCMQLQNLVELWLQTKPLNEKIQTHVGSSAKDFVMVLSYHRKS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1621 445 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 192 210 - -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 211 233 - -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 288 315 - -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 265 315 - -
Ahy9g1621 445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 110 IPR013083 -
Ahy9g1621 445 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 137 152 - -
Ahy9g1621 445 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 5 444 IPR044807 GO:0004842
Ahy9g1621 445 Coils Coil 100 120 - -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 265 287 - -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 189 233 - -
Ahy9g1621 445 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 5 444 - -
Ahy9g1621 445 MobiDBLite consensus disorder prediction 103 152 - -
Ahy9g1621 445 SUPERFAMILY RING/U-box 13 85 - -
Ahy9g1621 445 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Ahy9g1621 445 SMART ring_2 19 59 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1621 Ahy-Chr9 89430385 89434259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1621 1 367 C3H Transcription Factor Family AT2G30580 31.266 3.73e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1621 K16277 - jre:108989436 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1992 19 118115352 118119254 Ahy9g1621 9 89430385 89434259 hybridization