Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1617 ATGGCAACTATGTTGGCAAAGGAGCATGGCTTGAATCTGAAAGAGACTGAGCTTTGCCTTGGCCTGCCCGGCGGAGGTGGAGGCGGAGGCGGAGACACGGCAACGGCAGAAACTCCGAGAGCCACCGGGAAGAGAGGGTTCTCTGAGACGGTTGATCTGAAGCTTAACCTTCAAGGCAATGATACTAACAAGGAAGATCTGAATGAGAATCTGAAGAATGTTCCAAAGGAGAAGACTCTCCTTAAGGACCCTGCCAAGCCACCCGCTAAGGCTCAAGTAGTTGGATGGCCACCAGTGAGGTCATACAGAAAGAACATGATGGCACAAAAAGTGAGCACTGAGGAAAATAACAATGGCAGCGCCACCACTGAGAAGACAACAAGCAGCGCCGCCGCTGCAGCTACCACCGCTGCTTCTACTGGTGGTTCATTTGTGAAGGTCTCCATGGATGGAGCTCCTTACCTTCGCAAGGTCGACCTGACAATGTACAAAAGCTACCAAGACTTATCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGTAACTATGGGTCCCAAGGAATGATTGATTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGGATCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAAGCTATTGGGCTTGCGCCAAGGGCCATGGAGAAATGCAAAAGCAGAAGCTGA 783 0.4981 MATMLAKEHGLNLKETELCLGLPGGGGGGGGDTATAETPRATGKRGFSETVDLKLNLQGNDTNKEDLNENLKNVPKEKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVSTEENNNGSATTEKTTSSAAAAATTAASTGGSFVKVSMDGAPYLRKVDLTMYKSYQDLSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKSRS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1617 260 MobiDBLite consensus disorder prediction 22 48 - -
Ahy9g1617 260 Pfam AUX/IAA family 16 251 IPR033389 -
Ahy9g1617 260 SUPERFAMILY CAD & PB1 domains 139 241 - -
Ahy9g1617 260 ProSiteProfiles PB1 domain profile. 142 242 IPR000270 GO:0005515
Ahy9g1617 260 Gene3D - 137 254 - -
Ahy9g1617 260 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 253 IPR003311 GO:0005634|GO:0006355
Ahy9g1617 260 PANTHER AUXIN-RESPONSIVE PROTEIN IAA7 7 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1617 Ahy-Chr9 88861231 88864061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1617 119 245 B3 DNA Binding Superfamily AT3G61830 29.921 1.18e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy9g1617 AUX_IAA 6.20E-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1617 K14484 - gmx:100810762 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1986 19 117929305 117931993 Ahy9g1617 9 88861231 88864061 hybridization