Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1615 ATGGAGCTTCATCAACTTTACAATTGTCAGCAACTTTTGACTGCACAGTTAAGTGATAAACTTGAAAAAACTGAGGAATTAAGCAGTCAACAAGAATACATGAAGCTGAAGGCACGTTATGAAGCCCTACAAAGGTCCCAGAGAAACCTGATGGGAGAAGATCTTGGCCCTCTAAGCAGCAAAGAGCTGGAGTCACTGGAAAGGCAGCTAGTCGTTGAAGCTAATCAGATCCACAAGGACCCAATTCATGCTGGATCAGCTATCGAAACTTCAACGTGTAAGGTAATATTCATTTACAAGGACATGAACAATGAAAATGTTGAAATGATCTGTAGCAAATTTGTTGAGCATCTCTAG 357 0.4062 MELHQLYNCQQLLTAQLSDKLEKTEELSSQQEYMKLKARYEALQRSQRNLMGEDLGPLSSKELESLERQLVVEANQIHKDPIHAGSAIETSTCKVIFIYKDMNNENVEMICSKFVEHL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1615 118 ProSiteProfiles K-box domain profile. 26 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Ahy9g1615 118 Pfam K-box region 22 79 IPR002487 GO:0003700|GO:0005634|GO:0006355
Ahy9g1615 118 Coils Coil 33 53 - -
Ahy9g1615 118 PANTHER SERUM RESPONSE FACTOR HOMOLOG 22 78 - -
Ahy9g1615 118 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG 22 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1615 Ahy-Chr9 88558388 88559561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1615 26 78 MADS-box Gene Family AT1G24260 77.358 8.91e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1615 - - ahf:112713028 234.958