Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1545 ATGCCTACCATGAAGAAGAATTCTGAACAAACATCCTTTGGGTTAGTATTTAGCAAATTGGCAGAGGAGATTGGTGAACCTGTCGACTTTGAACTTCCAGAATGGTTTAATAAGTGCAAGCCAATGCCAGTAACATTTATAAAACGCAATATCTATCTGACAAAAAGGGTTAAAAGAAGGCTTGATGACGATGGCATATTTTGTTCTTGTACATCATCACCTGGATCTTCTGCTGTATGCGGTAAAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGGTTTCCTGTCTTAACAAACCATTCCAGCATCGACCCATCAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCAAGGAGAATTTGTGATAGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGATTATGGAACATGAAACTTCGTGGGGTGACAAACTTCTACCTATGTGAAATAAATCGAGATATGGTGATCGATGCAACATATAAAGGAAACAAATCAAGATATATAAATCATAGTTGCTGTCCTAATACTGAGATGCAGAAATGGATAATTGACGGTGAAACGAGAATTGGCATATTCGCAACGCGCGACATAAGGAAAGGCGAACATCTGACATATGATTATCACAGGTTTGTCCAGTTTGGTGCCGATCAGGATTGCCACTGCGGGGCTAATATGTGCAGGCGTAAGCTTGGTGTGAAACCTACCAAGCCTAAAACTTCTTCAGATGCTGCATTAAATTTATTCGGAGACCAGGTTTATCAGAATGGAGGTTTGCATATTGGAAATTCCCGCCTCTTTTGCCAATCAAACTGCCTTCGCAATTGCATTGGTGAAGTTGTTAGAATCAGACACCTTGATATCATAAGGTTCGGGATTATTAAGCGGTTTCATGAATATTCGAAGAAACACTCCATCATGTTTGAGGATGGACGTGTCGAATTTTTTGACATGTCCAAGGAAGATTGGGAACTGGTTACATTGTGA 1053 0.4008 MPTMKKNSEQTSFGLVFSKLAEEIGEPVDFELPEWFNKCKPMPVTFIKRNIYLTKRVKRRLDDDGIFCSCTSSPGSSAVCGKDCHCGMLLSSCSSGCKCGVSCLNKPFQHRPIKKMKLVQTEKCGSGIVADEDIKQGEFVIEYVGEVIDDKTCEERLWNMKLRGVTNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYHRFVQFGADQDCHCGANMCRRKLGVKPTKPKTSSDAALNLFGDQVYQNGGLHIGNSRLFCQSNCLRNCIGEVVRIRHLDIIRFGIIKRFHEYSKKHSIMFEDGRVEFFDMSKEDWELVTL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1545 350 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0018024
Ahy9g1545 350 SMART set_7 114 237 IPR001214 GO:0005515
Ahy9g1545 350 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0018024
Ahy9g1545 350 CDD SET_ASHR3-like 115 254 - -
Ahy9g1545 350 Pfam SET domain 125 230 IPR001214 GO:0005515
Ahy9g1545 350 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 11 270 - -
Ahy9g1545 350 PANTHER SET DOMAIN PROTEINS 270 347 - -
Ahy9g1545 350 Gene3D SET domain 33 269 IPR046341 -
Ahy9g1545 350 ProSiteProfiles Post-SET domain profile. 238 254 IPR003616 -
Ahy9g1545 350 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 270 347 - -
Ahy9g1545 350 PANTHER SET DOMAIN PROTEINS 11 270 - -
Ahy9g1545 350 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 309 IPR025787 -
Ahy9g1545 350 ProSiteProfiles SET domain profile. 114 231 IPR001214 GO:0005515
Ahy9g1545 350 SUPERFAMILY SET domain 27 244 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1545 Ahy-Chr9 83425377 83432268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1545 87 250 C2H2 Transcription Factor Family AT2G23740 34.426 2.99e-21 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy9g1545 SET 3.40E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1545 - - gmx:100808183 599.742