Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1474 ATGGCTGAACTGCATATCAGGCACAGAGAAATGTGCCTTGATGTTGATAACATGTCTTATGAGGAATTATTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCAAGGATGTCATTATAAAGTCGATGAAACAGCAAATATACATGTCTGTTATGGTGGAGTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGGAGGATTATACTGAAGGAGAGAGTGTTGGCTCGCTAGATTGTGGACATAAATTTCACAGTAATTGCATTGGCTACACAATATGCGGCAGAAGCAACTCTTAG 309 0.4142 MAELHIRHREMCLDVDNMSYEELLALEERIGDVSTGLSKDVIIKSMKQQIYMSVMVESSTDLEPCCICQEDYTEGESVGSLDCGHKFHSNCIGYTICGRSNS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1474 102 Pfam RING-like zinc finger 65 92 IPR001841 -
Ahy9g1474 102 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 93 IPR045191 GO:0061630
Ahy9g1474 102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 101 IPR013083 -
Ahy9g1474 102 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 93 - -
Ahy9g1474 102 SUPERFAMILY RING/U-box 42 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1474 Ahy-Chr9 74541379 74541968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1474 1 92 C3H Transcription Factor Family AT2G15530 64.211 5.11e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1474 - K19041 adu:107465729 211.46