Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1395 ATGTTTGATGGAGTGCCAGGAGACCAGTTCCATCAATTCATAACACCAACAAGAACAACAACAACAACCACCTCATCACAAATCCCTCTTCATCATCATTTACCTTTCCCTCTCCCTCTCCATCATCCTTCTTCTAATCCCACATCATCAAACCCCAACAACAACACTAACACTTTCCCTACTAATCCTACACCTTTTGATCCTTATCATCATCATCACCACCAATTGCAGCTTCACCAAGTTCATCATCAACACCCCAGTATCTTGCACCCATCATTACACCTTCACCAACACCACAACAACAATAACAAACATCATCATCATGATGAAGACCGGGAAGAAAACAACGCTAGCAGTACTTCCACTACTACTGTGCCAATGAATTTTGAAATTGAAAGAGATCATGAGAGGCAGCAAATGCCTCCTCCTCAGCTCATTGATCCTTGGAGTAATGATGAAGTACTTGCTCTCTTGAGGATCAGATCTACCATGGAGAGTTGGTTCCCACAACTCACTTGGGAACATGTCTCAAGGAAGATGGCAGAGCTTGGATATAAGAGGAGTGCTGAGAAGTGCAAAGAGAAGTTTGAAGAAGAAAGCAGATATTTCAGCAGCAACATTAACTTCACCAACAAAACCATTACTCCTCCTCCTACTACTACTACTGGTTACCGCTTTCTTAGTGAACTTGAAGAGCTTTATCATCAACAAGATAATAGTGATCATCATCATCAACAAGAAGTGGTGGTAGTGGAGAAGCAACCAAGTAGTACTGACGGGCAAGAAGACAAGGTAGTCATGGACCAAGCATTGGGAGAAGAAGATGATAAGGAGAATGATGAAGAGGTGGTTGCTGGGGCGGCCGTGGTGGTGTTGCCGGAGAAGATTATTACGACAAAAACAAAGGAGAGGAAGAGGAAGAGGGGTGGTGGAGATGGCGACGGCAACGGCGACGGCGTTAGGTTTGAGATGTTCAAAGGTTTTTGTGAAAGCATTGTGCACAAGATGATGGAGCAACAAGAAGAGATGCACAACAAGTTAATAGAAGATATGGTGAGAAGAGATGAAGAGAAGCTTGCAAGAGAAGAGGCATGGAAGAAGCAAGAGGTGGAGAGAATGAACAAGGAGCTTGAGATCATGCAACAGGAACAAGCCATTGCTGGTGATAGACAAGCAAACATCATTGAGTTCTTGAAGAAATTTGCCCCAGAAATTCAAACCCTTGTTTGTGTTGAAGAAGATCATGATGATCACAATAATAATGGAAGAAACAAATTAGTGAAGGTAACAAATAATAATAACAATGTTGAACACAATGGTTCAAATTTGTTGTTGCATTCCCAAAACCCTAATCCTCCATCATCACCTTCTTCTTCTTCTGCTGTGATTGTGAATAACCAAAATGGTGTTGTTGTTGCTGCTGCTTCTTCTTCAACAAACCCTAGCTCAAGTCCTATTATACAAGCTGGCAAGAACCCTAATAGTACTTATCTCAACAATGATAGCCCAATAGTAGAGGCGGACTCGGCGGCAAAGAAGGCGGCTGCCACGACTGCGAACTGCGAGAAAGATGAAATTGGAAGAAGATGGCCAAAAGATGAAGTGTTGGCACTGATAAACCTGAGGTGCAACACGCAAGTGAGCAGCAACAATGATGAAAATGGGAGAGAAACTCACAAGGCTCTTCCATTGTGGGAGAGAATCTCACAAGGGATGGTTGAATTGGGGTACACAAGGAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAAGATGCTAACAAGAAGAGGTCCCTTGATTCAAGAACTTGTCCCTATTTTCATCTTCTCAGTAGCCTCTATAGCCAAGGGAAGCTTCTTCTCCAACCTGAGAAGCAAGAAACTACTACTAATAATAATGATAACCATGGAAAAAAAATGGTCGGAGATCATCAAACTTCTTCACAAATGGGGTCTGCTATTGCTGCTGATGATAATCATGATCATGGAGGTGAGAATAACAATAATAATAAAGCTTTGATGCAAGCACCTTCTTTGGATTTTGATCAGTTTTAA 2079 0.4194 MFDGVPGDQFHQFITPTRTTTTTTSSQIPLHHHLPFPLPLHHPSSNPTSSNPNNNTNTFPTNPTPFDPYHHHHHQLQLHQVHHQHPSILHPSLHLHQHHNNNNKHHHHDEDREENNASSTSTTTVPMNFEIERDHERQQMPPPQLIDPWSNDEVLALLRIRSTMESWFPQLTWEHVSRKMAELGYKRSAEKCKEKFEEESRYFSSNINFTNKTITPPPTTTTGYRFLSELEELYHQQDNSDHHHQQEVVVVEKQPSSTDGQEDKVVMDQALGEEDDKENDEEVVAGAAVVVLPEKIITTKTKERKRKRGGGDGDGNGDGVRFEMFKGFCESIVHKMMEQQEEMHNKLIEDMVRRDEEKLAREEAWKKQEVERMNKELEIMQQEQAIAGDRQANIIEFLKKFAPEIQTLVCVEEDHDDHNNNGRNKLVKVTNNNNNVEHNGSNLLLHSQNPNPPSSPSSSSAVIVNNQNGVVVAAASSSTNPSSSPIIQAGKNPNSTYLNNDSPIVEADSAAKKAAATTANCEKDEIGRRWPKDEVLALINLRCNTQVSSNNDENGRETHKALPLWERISQGMVELGYTRSAKRCKEKWENINKYFRKTKDANKKRSLDSRTCPYFHLLSSLYSQGKLLLQPEKQETTTNNNDNHGKKMVGDHQTSSQMGSAIAADDNHDHGGENNNNNKALMQAPSLDFDQF* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1395 692 Gene3D - 530 597 - -
Ahy9g1395 692 Gene3D - 149 204 - -
Ahy9g1395 692 CDD GT1 528 599 - -
Ahy9g1395 692 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 35 675 - -
Ahy9g1395 692 Coils Coil 363 383 - -
Ahy9g1395 692 MobiDBLite consensus disorder prediction 43 64 - -
Ahy9g1395 692 MobiDBLite consensus disorder prediction 1 124 - -
Ahy9g1395 692 MobiDBLite consensus disorder prediction 635 692 - -
Ahy9g1395 692 SMART sant 145 202 IPR001005 -
Ahy9g1395 692 SMART sant 526 594 IPR001005 -
Ahy9g1395 692 ProSiteProfiles Myb-like domain profile. 148 200 IPR001005 -
Ahy9g1395 692 Pfam Myb/SANT-like DNA-binding domain 147 204 IPR044822 -
Ahy9g1395 692 Pfam Myb/SANT-like DNA-binding domain 528 620 IPR044822 -
Ahy9g1395 692 MobiDBLite consensus disorder prediction 635 662 - -
Ahy9g1395 692 MobiDBLite consensus disorder prediction 432 461 - -
Ahy9g1395 692 MobiDBLite consensus disorder prediction 12 30 - -
Ahy9g1395 692 PANTHER - 35 675 - -
Ahy9g1395 692 ProSiteProfiles Myb-like domain profile. 529 592 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1395 Ahy-Chr9 62047713 62050944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1395 148 624 Trihelix Transcription Factor Family AT5G28300 43.615 4.72e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy9g1395 Myb_DNA-bind_4 1.70E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1395 - - ahf:112775947 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g0786 6 9943985 9947615 Ahy9g1395 9 62047713 62050944 PCT
Ahy9g1395 9 62047713 62050944 Ahy6g0786 6 9943985 9947615 PCT