Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1392 ATGGAGCAGTATGATATACTTGAGCAAATTGGCAAAGGTGCTTTCGGTTCTGCGCTTCTCGTGAGACATAAGCATGAGAAGAAAAAATATGTACTCAAGAAGATTCGCCTTGCACGCCAAACGGAGCGAACTCGTAGATCTGCACACCAGGAGATGGAGCTTATTTCTAAATTTCGAAACCCATTTATTGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTATGTCTGCATTATCATAGGTTACTGTGAGGGTGGGGATATGGCGGAAGCTATAAAGAAAGCTAATGGTTTGCTGTTCCCAGAGGAGAAACTCTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTATTTGCACATGAACCACATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGACATACGTCTCGGTGATTTTGGACTTGCCAAAATGTTGACTTCTGATGATCTTGCTTCCTCTGTTGTTGGAACTCCTAGCTACATGTGCCCCGAGCTCCTAGCTGATATACCTTATGGTTCCAAATCGGATATTTGGTCCCTGGGATGTTGTATATATGAAATGACATCACTCAAGCCTGCATTTAAAGCATTTGATATACAAGCATTGATTAACAAGATTAATAGGTCCATAGTGGCTCCATTACCAACGAAATATTCTGGTTCATTTCGAAGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGGCCCAGTGCTGCAGAGCTGCTTGGGCACCCACATCTTCAACCATATGTTCTTAAGATTCATCTCAAAATTAATAGCCCCAGGCAAAATTCATTACCAGTCCAATGGCCAGAATCCAAGTACATGAAGAAAACCAGATTCTTGGAGCGGAAAGATGAACATGTTTCTATCTATAGGGATAAAAGGCGTTCTTTTAGCAATGATCGGACTCTAAACCCTAGTGTTTCTGGAGCTGATCAAGATTCTGTATGTTCCACCCTAGAAATAGATTGTACTCCTGATGATTTAAATCAGAGGTTAGCAGAGTTGAGTGTCAGAGGTAGCCATGGAATGAAGTCAATCCATAAGCCTGTTCTCTCCAGAACTTCTAGTATGGCTAAGATTCCCAGGATCAGTCATGCAAAACTTTCTTCTACCAACAAGAAATTAATGGAACCCACAAAGGATCTTAAGGCAGGAAGGCAATCTCTTCCTGCTTCAAACAATTCCACAAAATCTACCCAAACAAATCGCAGAGCATCCTTTCCACTGCCATCAAAGGGTACTCAGAAGCCTCCTCACAGGCCTAGTAGTATTGGTTTGCTTAGCCATGTATCTTCACCAGATATTTCAGTCAACTCTCCCCGAATTGATAAGATAGCTGAATTCCCATTAGCATCATATGAAGATCCACTGTTCCGATTCAACAGATCATCAACTGTGATTGACAAATGCACAATAGATGTATATGATAAAGCCTCTGTTAGGGCTTGTAATGCTGATACTTGGCAAGGAATCAAGCGCAGCATGTTGAAGGAAAACGACGAGGACAAAAAAAGTGGTTCATCTGATCAAAATGCAACAGCAGGTGCATCGAGTCACACCTCTTCGGATCTGCGCCGCCGACAGTTTGATACTTCATCGTACCAACAGAGGGCCGAAGCCTTGGAAGGGCTGCTTGAATTCAGTGCAAGATTGCTGCAGCAGGCAAGGTATGATGAACTCGGGGTTTTGTTGAAACCATTTGGGCCTGAGAAGGTTTCCCCAAGGGAAACTGCAATCTGGTTGAGTAAGAGCTTCAAAGAGAACACATTCAACCCTGAAGAATCCCCGTAA 1830 0.424 MEQYDILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERTRRSAHQEMELISKFRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGLLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDIQALINKINRSIVAPLPTKYSGSFRSLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKINSPRQNSLPVQWPESKYMKKTRFLERKDEHVSIYRDKRRSFSNDRTLNPSVSGADQDSVCSTLEIDCTPDDLNQRLAELSVRGSHGMKSIHKPVLSRTSSMAKIPRISHAKLSSTNKKLMEPTKDLKAGRQSLPASNNSTKSTQTNRRASFPLPSKGTQKPPHRPSSIGLLSHVSSPDISVNSPRIDKIAEFPLASYEDPLFRFNRSSTVIDKCTIDVYDKASVRACNADTWQGIKRSMLKENDEDKKSGSSDQNATAGASSHTSSDLRRRQFDTSSYQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPEKVSPRETAIWLSKSFKENTFNPEESP* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1392 609 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Ahy9g1392 609 PANTHER SERINE/THREONINE-KINASE NEK4 1 594 - -
Ahy9g1392 609 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy9g1392 609 SUPERFAMILY Protein kinase-like (PK-like) 1 300 IPR011009 -
Ahy9g1392 609 CDD STKc_Nek 3 258 - -
Ahy9g1392 609 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g1392 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Ahy9g1392 609 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 594 - -
Ahy9g1392 609 MobiDBLite consensus disorder prediction 399 422 - -
Ahy9g1392 609 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g1392 609 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g1392 609 MobiDBLite consensus disorder prediction 509 542 - -
Ahy9g1392 609 MobiDBLite consensus disorder prediction 352 448 - -
Ahy9g1392 609 Gene3D Transferase(Phosphotransferase) domain 1 86 321 - -
Ahy9g1392 609 MobiDBLite consensus disorder prediction 521 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1392 Ahy-Chr9 61485882 61493352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1392 10 259 MAP Kinase Kinase Kinase AT1G53570 31.373 1.73e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Ahy9g1392 Pkinase 3.60E-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1392 K08857 - gmx:100804898 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0775 12 13688806 13694840 Ahy9g1392 9 61485882 61493352 hybridization
Ahy16g0187 16 1970324 1974339 Ahy9g1392 9 61485882 61493352 PCT
Ahy6g1137 6 16628005 16632236 Ahy9g1392 9 61485882 61493352 PCT
Ahy9g1392 9 61485882 61493352 Ahy16g0187 16 1970324 1974339 PCT
Ahy9g1392 9 61485882 61493352 Ahy6g1137 6 16628005 16632236 PCT