Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1368 ATGGCTGGTAACAATAATAACGGGTCGGAAGGTTTGGGCGACGATTTCTTCGAACAGATCTTGGCGGTTCCAAGTGAGTATGGCGGCGGTGGCGGTAGAACATTAGTGGGGTCCATGCCAATGGTGCTTCAGTTGGGGTCCACAGTATCAAGGACTACTGTTCCGGATGGCTTAAGAATGGGGATGCCTTTGGGTTTGAATTTGGAGCAAACTGGTTTCCTTAGACGCTTTCCTGAACAAGTTTCTGATGTTGAGGCTGCCATTAACAACAACCACCACCACCAACAACAATACCTTCGTCTTAGTAACAATACCAACAACAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGCTCTCCATCTTCCTCTTCTACTGCTGGAATCACTACTGATCGGGATTCGATGCACATGAGAGGTTTGTTTCCAGCGTTTGGACAGTTGCAAAATACTCCCCCCCTTCCTCCTCCTACTCAGCCACCTCTTCGCCCCACTCTTCCATCTCCTCTCCACCACCACCAGGCATTTCAGAGGCAGCAAGCCCCAAATCCAGTGTCTGTAACTGCTCTGCCACAACAACCACCGGGGATACGCCCTCGAGTGCGAGCAAGAAGAGGCCAAGCTACCGATCCTCACAGTATTGCTGAGAGGTTACGTCGTGAGAGGATTGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAGACGGACAGAGCAGCCATGCTTGATGAAATTGTGGATTATGTCAAGTTTCTAAGGCTCCAAGTTAAGGTATTGAGCATGAGTAGACTAGGTGGGGCTGGCGCTGTTGCCCAGCTTGTGGCTGATGTTCCTCTATCTGCTGTCGAGGGTGAGGAAATAGAAGGTGGAGGGAACAACGAGCAAGCATGGGAGAAATGGTCAAATGATGGAACAGAGCAACAAGTTGCAAAGTTAATGGAAGAAGATGTTGGAGCTGCCATGCAATTCCTTCAGTCCAAGGCACTTTGCATTATGCCTATTTCTCTTGCCTCAGCCATTTTCCGTATGCCTCCTTCAGAACCATCATCACTCATCAAGCCTGAATCTAACTCCCATTCATAG 1110 0.4676 MAGNNNNGSEGLGDDFFEQILAVPSEYGGGGGRTLVGSMPMVLQLGSTVSRTTVPDGLRMGMPLGLNLEQTGFLRRFPEQVSDVEAAINNNHHHQQQYLRLSNNTNNNNNNNNNNNNNNNNNNSSPSSSSTAGITTDRDSMHMRGLFPAFGQLQNTPPLPPPTQPPLRPTLPSPLHHHQAFQRQQAPNPVSVTALPQQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEGEEIEGGGNNEQAWEKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPPSEPSSLIKPESNSHS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1368 369 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 356 - -
Ahy9g1368 369 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 261 IPR011598 GO:0046983
Ahy9g1368 369 SMART finulus 218 267 IPR011598 GO:0046983
Ahy9g1368 369 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 10 356 - -
Ahy9g1368 369 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 271 IPR036638 GO:0046983
Ahy9g1368 369 MobiDBLite consensus disorder prediction 102 136 - -
Ahy9g1368 369 Pfam Helix-loop-helix DNA-binding domain 217 261 IPR011598 GO:0046983
Ahy9g1368 369 Gene3D - 207 269 IPR036638 GO:0046983
Ahy9g1368 369 MobiDBLite consensus disorder prediction 177 192 - -
Ahy9g1368 369 MobiDBLite consensus disorder prediction 154 172 - -
Ahy9g1368 369 MobiDBLite consensus disorder prediction 150 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1368 Ahy-Chr9 56716849 56734731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1368 174 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 73.196 1.27e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g1368 HLH 3.80E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1368 - - lang:109355094 396.741