Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1356 ATGCTTTCCCCGTTTGTTTCGTGGCTCTTGTCTTCCACCACCTCCTCCTCTTCCTCTTCATCTTCTGATGAACAAGAACAAAGCATTGACATAGACGACACTTCAACCGACCAAATAGACCCTGAAAACGACATTGTCAACGACCAAAACGACAACAATCACCAAACAAACGGGGACGAAAATGATGAGCATTTTCTTAGTTCATGCGACGGGGACGACGCAATTCCCGTTGCTCTTGCCGTTCCCGCCACCGAACCCTCCCCGAGCCCCGCCGTCACGGTGGCCTTTACCGCTGCTGATGATAGAATCCCCGTCGCAACCACAGCCGCAGCCACCACCATCATGACACAGTCGAAACGGCAGCGTGCCACGAACTACGCAGGCATGATTAGGCAATACCAGAGGCTTTGGACAAAGCAGGACGAGATAGAACTATTGAGAGGGTACCTTGAATGCGTTAGACGAAACAGAGGCGTAAGAAAGTCCCTCCAAAACGACGTAGCTTTGTTCTACGGTGACGTGTGCCACAAGCTAAACGTGGATTTCAACAAGAACCAGCTTGTTGAGAAACTGAGGAGGCTAAAAAGGAAACACAAGGTGACTCTGGATAAGGGCAATTTGGGAAAAGTGTCCTTCAGAAACCCTCAGGACGAGACGATTTTCGAGATTTCGCACAAGATTTGGGGCAAAGACATTGATACTGACCAATTAGAACAAGAAGAAGAAGAAGAAGCATTGTATATGGATGGTGGTGGGGTTGATGATGATCATGGCAAGGTTAAGCTGAAAGTTGAAAAGGTTGTGAGTTGTGATGAGATTGAGAAAAGGGCGCCGAAGCGGCCGCGACTAAGCAAAAATCGCGACGAGACAGCAACGGCTGCTGACATGCAGATCCAGAGCTTCATTGAGGAAACCATGAGGTCTTGTTTCTCACCATTGATAAAGGAATTGTTGGATGATGAAGGAGGACCGAAGCCGGTAGAGTTTTCCCCTTCCCTTGGAGATGAGGGTGATGAGCAATGGAGGAAGCAGAGGATTTCAGAGCTCGAAGTGTATTTGAATCGGTTAGAGTTGTTACAGGATCAGATCAAGGCTAAATTAGAAGAGCTTAGGTCAGGTTCAAGGAATTGA 1131 0.4801 MLSPFVSWLLSSTTSSSSSSSSDEQEQSIDIDDTSTDQIDPENDIVNDQNDNNHQTNGDENDEHFLSSCDGDDAIPVALAVPATEPSPSPAVTVAFTAADDRIPVATTAAATTIMTQSKRQRATNYAGMIRQYQRLWTKQDEIELLRGYLECVRRNRGVRKSLQNDVALFYGDVCHKLNVDFNKNQLVEKLRRLKRKHKVTLDKGNLGKVSFRNPQDETIFEISHKIWGKDIDTDQLEQEEEEEALYMDGGGVDDDHGKVKLKVEKVVSCDEIEKRAPKRPRLSKNRDETATAADMQIQSFIEETMRSCFSPLIKELLDDEGGPKPVEFSPSLGDEGDEQWRKQRISELEVYLNRLELLQDQIKAKLEELRSGSRN* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1356 376 MobiDBLite consensus disorder prediction 320 339 - -
Ahy9g1356 376 MobiDBLite consensus disorder prediction 1 25 - -
Ahy9g1356 376 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 372 - -
Ahy9g1356 376 Coils Coil 184 204 - -
Ahy9g1356 376 MobiDBLite consensus disorder prediction 1 69 - -
Ahy9g1356 376 MobiDBLite consensus disorder prediction 55 69 - -
Ahy9g1356 376 Coils Coil 349 376 - -
Ahy9g1356 376 Pfam Protein of unknown function, DUF573 134 229 IPR007592 GO:0006355
Ahy9g1356 376 MobiDBLite consensus disorder prediction 40 54 - -
Ahy9g1356 376 PANTHER BNAANNG10740D PROTEIN-RELATED 1 372 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1356 Ahy-Chr9 54668857 54670380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1356 82 372 GeBP Transcription Factor Family AT5G28040 35.593 8.88e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ahy9g1356 DUF573 1.60E-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1356 - - ahf:112775206 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1038 16 18799530 18801933 Ahy9g1356 9 54668857 54670380 PCT
Ahy6g0337 6 4144023 4145999 Ahy9g1356 9 54668857 54670380 PCT
Ahy9g1356 9 54668857 54670380 Ahy16g1038 16 18799530 18801933 PCT
Ahy9g1356 9 54668857 54670380 Ahy6g0337 6 4144023 4145999 PCT