Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1322 ATGGCGCCTAATCGTAGAGTTACCAATGCCTATAATGCTATGAGAATCTTAGGCATTTCTGATGATGAGGTGATGCCTGTCTTGAAAAGGTTGCTCAAAGTGTATGGTAATAGCTGGGAGCTTATTGAAGAAGACAATTATCAAACACTTATACATGCATACTTTGAGTCAATGGAATATCAGCAAGAGAAAGGTAAGGGAAAAGCTCCAATCAGTAATCATGATGGAGAAAGAGCAAGACTGAAACTACAGATGATATCTGTAGTGGACAATGAAATACTTTCAAAGACATCCAAAAAGAAAATCATTAAGCCATCTCAGGCATCTAAAGAAGATATGAAACTGGCAAACAGTTCTCAACCATTGCAGACAAGGTTGAGTGAGGTAGAAATTATCTCAAGTTTATCTTGCATGGATGCTAGAGATAGTAAAAAATTGTGCCATGAGAATGCAGCATCTGCAAGGGATTGTGGAGATTCTTTTGATGGATCTAGCCGTTCCCACATCCAGAAGATACATATGTCAAGTAATCGTTATGAGAAAGAACTTATAATATTAAAAGCTAAGAAACCAAAATTACATCTTGAACCTGTTTCATCACATCTAAAAGGCCCTTGTGATGATTCAAATGTAAATCATCGTTTCAAATTTATATCAGCTCTTTATCAAAATGGGCCAAATCCCAATCATGCCAATTTGAGTAACATGGTACAACAAGCTATTGTCCATCCTGAATATAATTCTGCAGGCCCATGCGATGATTCAAACACAAATCGTCATTTCAAATCTATATCATCTCTTTATCAAAATGGGCCAAATCTCAATCATGCGAATTTGACAAACATGGTACAACAAGCTGTTGTTCATCCTGAACATAATTCTAGAGGCCCATGCGATGATTCAAATGTAAATTGTCGTTTCAAATCTATATCAACTCTTTATCAATATGGACCAAATCTCAATCATGCTAATTTGACAAAAATAGCACAAAAAGCTATTGTTCATGCTGAAAATAGTTCTATTCAAATTCTGAGTGACATAACAAAAGGTTCTGAAAAGGTTGCAATTTCATTATTAGATGAAACTGGAAGTGAGGAGTTGCCTAAGTTTAATTACATACCAAATAATATAATCTATCAAAATGCTAATGTGAACATTTCACTTGCTCGGGTTGCGGATGAGGATTGTTGTTCTGATTGTTCAGGCAACTGTCTTTCTTTAACATTTCCTTGTGCATGTTCTCAAGAAACTGGTGGGGAGTTTGCTTATACTCGAGAAGGTTTGGTGAAGGAAAAGTTCTTAGAAGCATGCATAGCTACAAAAATCAAACCTCAACCATATCATTTTGTGTATTGTCAAGAATGCCCAATTTATAAAGGGAGTGAGCACATGCCTGAAGAATGCAAGGGGCATTTGGTTAGAAAGTTTATAAAGGAATGTTGGAGGAAATGTGGATGTGATATGCAGTGTGGAAATCGGGTAGTGCAACGAGGTTTAAGATGTAAACTGCAGGTATTCTTGACTCAGGAAGGAAAGGGTTGGGGCATTAGAACACTAGAAGATTTGCCCAAAGGTTGCTTTGTATGTGAGTACGTCGGGGAAATATTAACCAATGCAGAATTGTATGAAAGGGTATTGCACAAAAGCAGCAAGGACAGACATACATATCCTGTAACCCTTGATGCAGATTGGGGCTCAGAAAGGGTGTTAAAGGATGATGAGGCACTCTGCTTAGATGCAACTTATAATGGAAATATTGCAAGGTTTATCAATCATAGATGCTTTGATGCAAATTTGATAGACATTCCTGTTGAAGTGGAGATTCCTGATCGCCACTATTATCATATTGCTCTCTTTACTAATAGGAAAGTGAAAGCATACAAAGAGCTGACATGGGATTATGGTATTGACTTTGATGATCAGGAACATCCTATTAAAGCATTTCAATGCTGCTGTGGAAGTACCTTCTGCCGTGACAAGAAAAAGAAAGGAACTGGCATGAAAGCTAAAAAACAAAGGTAG 2022 0.3709 MAPNRRVTNAYNAMRILGISDDEVMPVLKRLLKVYGNSWELIEEDNYQTLIHAYFESMEYQQEKGKGKAPISNHDGERARLKLQMISVVDNEILSKTSKKKIIKPSQASKEDMKLANSSQPLQTRLSEVEIISSLSCMDARDSKKLCHENAASARDCGDSFDGSSRSHIQKIHMSSNRYEKELIILKAKKPKLHLEPVSSHLKGPCDDSNVNHRFKFISALYQNGPNPNHANLSNMVQQAIVHPEYNSAGPCDDSNTNRHFKSISSLYQNGPNLNHANLTNMVQQAVVHPEHNSRGPCDDSNVNCRFKSISTLYQYGPNLNHANLTKIAQKAIVHAENSSIQILSDITKGSEKVAISLLDETGSEELPKFNYIPNNIIYQNANVNISLARVADEDCCSDCSGNCLSLTFPCACSQETGGEFAYTREGLVKEKFLEACIATKIKPQPYHFVYCQECPIYKGSEHMPEECKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLRCKLQVFLTQEGKGWGIRTLEDLPKGCFVCEYVGEILTNAELYERVLHKSSKDRHTYPVTLDADWGSERVLKDDEALCLDATYNGNIARFINHRCFDANLIDIPVEVEIPDRHYYHIALFTNRKVKAYKELTWDYGIDFDDQEHPIKAFQCCCGSTFCRDKKKKGTGMKAKKQR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1322 673 Pfam SET domain 513 635 IPR001214 GO:0005515
Ahy9g1322 673 Pfam Ubiquitin-binding WIYLD domain 4 59 IPR018848 GO:0018024
Ahy9g1322 673 Gene3D - 1 59 IPR043017 -
Ahy9g1322 673 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 668 - -
Ahy9g1322 673 Gene3D SET domain 322 647 IPR046341 -
Ahy9g1322 673 CDD SET_SETDB-like 368 635 - -
Ahy9g1322 673 SUPERFAMILY SET domain 356 658 IPR046341 -
Ahy9g1322 673 Pfam Pre-SET motif 347 493 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy9g1322 673 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 668 - -
Ahy9g1322 673 SMART set_7 501 641 IPR001214 GO:0005515
Ahy9g1322 673 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 673 IPR025776 -
Ahy9g1322 673 ProSiteProfiles Pre-SET domain profile. 400 498 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy9g1322 673 ProSiteProfiles SET domain profile. 501 635 IPR001214 GO:0005515
Ahy9g1322 673 SMART preset_2 344 485 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1322 Ahy-Chr9 45815611 45827071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1322 477 658 C2H2 Transcription Factor Family AT2G23740 39.572 4.25e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy9g1322 Pre-SET 2.10E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1322 - - adu:107465821 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1007 12 22720928 22730597 Ahy9g1322 9 45815611 45827071 hybridization
Ahy16g1105 16 20023808 20034285 Ahy9g1322 9 45815611 45827071 PCT
Ahy6g0287 6 3572791 3580999 Ahy9g1322 9 45815611 45827071 PCT
Ahy9g1322 9 45815611 45827071 Ahy16g1403 16 28327607 28335305 PCT
Ahy9g1322 9 45815611 45827071 Ahy6g0064 6 941375 949266 PCT