Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1299 ATGTTGTTAATGAAACCCTTAACAAGCCATGTCAAGGTAGCTTATGTTCTTGAAATGGGGTGTGTGATTAGCCGAGAGGTGCAATCGGGGATTGTCTCTGAGGTGAAGGAGGAGAAGGGTTTGAGTGCTGAGTTGAGCAGGAAGGTTGGTGATGTGTCTACAAGCAATATTGATGTAGGCGAGGTGGAGATTCAGAATGGCGAGAAGCAGAGGGAAAAAGAAGAGAATGGTAGCAATGATGAGCAGCCTCGGAAAGCGAGGGGCGAAAGAAGAAGATCAAAGCCAAACCCAAGGATGAGTAATCCCCCTAAGAATTTGAGGGGGGAGCAAGTAGCAGCTGGGTGGCCACCGTGGCTTACGGCAGTTTGTGGGGAAGCACTCAGTGGCTGGATTCCTCGAAAGGCTGACACATTTGAGAAAATTGATAAGATTGGTCAAGGAACATATAGTAATGTGTACAAAGCTAAGGACATGTTGACTGGTAAGATCGTTGCATTGAAGAAGGTCCGATTTGACAATTTGGAACCTGAGAGTGTCAAATTCATGGCAAGGGAGATTATTATTTTGCGAAGATTGGATCACCCCAACGTTGTAAAGCTAGAAGGTTTAGTTACATCAAGAATGTCCTTGAGTTTGTATCTCGTTTTTGATTACATGGTGCATGATTTAGCTGGTCTTGCTGCAAGCCCTGAAATAAAGTTTACAGAACCTCAGGTCAAATGTTACATGCATCAATTGTTATCAGGTCTTGAGCACTGTCATAATCGAAATGTGCTTCACCGTGATATTAAAGGATCAAATCTACTTATCGACAATGATGGAGTACTTAAGATTGCTGATTTTGGTCTTGCATCATTCTTTGATCCGAACCGCAAGCAACCCATGACTAATCGTGTAGTAACCCTTTGGTATAGACCTCCGGAGTTGCTTCTTGGTGCCACAGATTATGGTGTGGGCATTGACCTTTGGAGTGCTGGTTGCATTCTAGGAGAGCTATTGGCTGGGAAACCTATTATGCCTGGTCGTACAGAGGTGGAACAATTGCATAAGATATACAAACTTTGCGGTTCACCTTCTGATGAGTATTGGAAGAAATCAAAGTTGCCTAATGCTACCTTGTTTAAACCTAGAGAGCCATATAGGAGATGCATAAGAGAGACATTTAAAGATTTTCCACCTTCTACACTAGCCCTTATTGACACTCTTCTTGCAATTGATCCCGCTGAACGGAAGACTGCCTCATATGCTTTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTTGTCTTCCAAAATATCCCCCGACCAAGGAAATGGATGCTAAACGACGGGATGATGAAGCAAGGAGATTAAGAGCTGCTGGAAAAGCTCATGGGGATGGTGCAAAGAAGCATCATCGTACACGTGAACGTACTGCAAGAGCTATTGCTGCTCCTGAAGCCAATGCCGAGCTTCAACCCAACATTGATCGAAGGCGTCTCATCACTCATGCGAATGCTAAGAGCAAGAGTGAAAAGTTCCCTCCACCTCATGAAGACGGGCAACTTGGATACCCGTTGGGATCTTCAAACCATATTGATCCAGACACTCTCCCTCCTGATGTCTCTTTTGTTTCAACCACATACAACTACACAAAGGAACCATTCCAGGCATGGTCTGGTCCGATCGGTGTGCCAAAGCAGAAGAAACACAATAATGCAGGTGATGCATTGGATTTATCCAAACCACATAAAAGTGCCCTCAAGGACAAGGTTAAAGGAAAGAAAATCATAGTTTAG 1791 0.4394 MLLMKPLTSHVKVAYVLEMGCVISREVQSGIVSEVKEEKGLSAELSRKVGDVSTSNIDVGEVEIQNGEKQREKEENGSNDEQPRKARGERRRSKPNPRMSNPPKNLRGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIIILRRLDHPNVVKLEGLVTSRMSLSLYLVFDYMVHDLAGLAASPEIKFTEPQVKCYMHQLLSGLEHCHNRNVLHRDIKGSNLLIDNDGVLKIADFGLASFFDPNRKQPMTNRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYRRCIRETFKDFPPSTLALIDTLLAIDPAERKTASYALRSEFFTTEPYACDPSCLPKYPPTKEMDAKRRDDEARRLRAAGKAHGDGAKKHHRTRERTARAIAAPEANAELQPNIDRRRLITHANAKSKSEKFPPPHEDGQLGYPLGSSNHIDPDTLPPDVSFVSTTYNYTKEPFQAWSGPIGVPKQKKHNNAGDALDLSKPHKSALKDKVKGKKIIV* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1299 596 MobiDBLite consensus disorder prediction 439 473 - -
Ahy9g1299 596 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g1299 596 Gene3D Phosphorylase Kinase; domain 1 125 220 - -
Ahy9g1299 596 MobiDBLite consensus disorder prediction 64 96 - -
Ahy9g1299 596 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Ahy9g1299 596 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g1299 596 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g1299 596 PANTHER OS01G0367700 PROTEIN 63 568 - -
Ahy9g1299 596 MobiDBLite consensus disorder prediction 56 110 - -
Ahy9g1299 596 PANTHER CELL DIVISION PROTEIN KINASE 63 568 - -
Ahy9g1299 596 MobiDBLite consensus disorder prediction 440 462 - -
Ahy9g1299 596 CDD STKc_CDK9_like 138 422 - -
Ahy9g1299 596 SUPERFAMILY Protein kinase-like (PK-like) 133 429 IPR011009 -
Ahy9g1299 596 MobiDBLite consensus disorder prediction 559 590 - -
Ahy9g1299 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Ahy9g1299 596 MobiDBLite consensus disorder prediction 569 590 - -
Ahy9g1299 596 Gene3D Transferase(Phosphotransferase) domain 1 221 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1299 Ahy-Chr9 40851622 40857411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1299 130 460 Core Cell Cycle Gene Families AT5G10270 51.009 3.29e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy9g1299 Pkinase 2.00E-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1299 K08819 - gmx:100817289 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1606 19 52437251 52444281 Ahy9g1299 9 40851622 40857411 hybridization
Ahy16g1020 16 18440122 18444222 Ahy9g1299 9 40851622 40857411 PCT
Ahy6g0353 6 4372625 4376693 Ahy9g1299 9 40851622 40857411 PCT
Ahy9g1299 9 40851622 40857411 Ahy16g1020 16 18440122 18444222 PCT
Ahy9g1299 9 40851622 40857411 Ahy6g0353 6 4372625 4376693 PCT