Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1279 ATGGAGAAAGAGAAAGAAGATGAGACATCTCCAAGGGGTGTCTTAGAAGCTGAGTCAGAGCAACAAGCATCTGAATCAAATGCAAGTGGTTCAAGTAGTTCAAGCAGAGCACGCTCTCGATGGGGCAAAATTTTCAAATTGTGGAAAATTAGACCAACTAAGAATCACCTACCTTCATTACACACTCTTAGTTTCTCCAAGTTACGATGGAAGAGCAAAAGCACTAAAGAAGATACTACTACTACTCTACATACTGGTTTCTACAACTTCAGGTCTTCTTTGATCACTTTTAGCCTTTCAGAATTACAATATGCAACCAACAATTTTAGCAGCGAAAATTTAATAGGAAGAGGTGGTTTTGCTGAGGTTTATCAGGGTTGTCTTGAAGAAGGGAAACTAATAGCAGGGAAGAAATTGACGAATGGAAGCTTAGAAGAAAAGACAGCAGATTTTCTATCAGAACTTGGCGTGATTGCCCATGTTGATCATCCTAATACTGCCAAGATTATTGGATGCTGTGTCGAACGAGACATGCATCTTCTTGTCTTTTCACTTTCTCCTCTCGGAAGTTTGGGATCTCTTATTCATGGTCCAAATAAACACAAACTAGATTGGAGTAAAAGATACAAGATTGCTTTGGGAATAGCTGATGGTTTACTCTATCTACATGAGAATTGTCACAGACGGATTATTCATAGAGATATTAAAGCAGAGAATATTTTGCTCACCGAGAATTTTGACCCACAGATTTGTGATTTCGGGCTCGCAAAATGGTTACCAGAACAGTGGACTCACTGCAACGTAACGAAAATTGGAGGCACATTTGGGTATTTTGCACCTGAATATTGCATGCATGGCATAGTAGATGAGAAAACTGATATATTTTCTTTTGGGGTCTTACTTCTGGAGATCATAAGTGGGCGTCCAGCTTTGGATGATATGCAGAAAAGCCTTGTGCTGTGGGCCAAACCTTTGCTTGAAGCTAAGAATATTGAAGCACTTGTTGATCCTTCTCTTGATGATGATTATGATAAGGACCAAGTAGGTCATGTTGTTTTCACTGCATCAAAGTGTGTTGATCAGTCTCCTATTTTAAGGCCTTGCATGAGTGAGGTTGTGACACTACTAAGAGGTCATGATAAGTGTGACTTAGAATCAAGAAAAGGTCAAAGAAAGTCGCTTCAGAGAACATACTCAGAAGAGCTACTAGATGCACAAGAATACAACTCAACAAAATATCTTAGAGATCTCAATCGACATAGACAACTTGCCTTGGGTTCTTGTGAATCTTGA 1293 0.3929 MEKEKEDETSPRGVLEAESEQQASESNASGSSSSSRARSRWGKIFKLWKIRPTKNHLPSLHTLSFSKLRWKSKSTKEDTTTTLHTGFYNFRSSLITFSLSELQYATNNFSSENLIGRGGFAEVYQGCLEEGKLIAGKKLTNGSLEEKTADFLSELGVIAHVDHPNTAKIIGCCVERDMHLLVFSLSPLGSLGSLIHGPNKHKLDWSKRYKIALGIADGLLYLHENCHRRIIHRDIKAENILLTENFDPQICDFGLAKWLPEQWTHCNVTKIGGTFGYFAPEYCMHGIVDEKTDIFSFGVLLLEIISGRPALDDMQKSLVLWAKPLLEAKNIEALVDPSLDDDYDKDQVGHVVFTASKCVDQSPILRPCMSEVVTLLRGHDKCDLESRKGQRKSLQRTYSEELLDAQEYNSTKYLRDLNRHRQLALGSCES* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1279 430 Gene3D Phosphorylase Kinase; domain 1 69 184 - -
Ahy9g1279 430 Gene3D Transferase(Phosphotransferase) domain 1 187 402 - -
Ahy9g1279 430 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 1 422 - -
Ahy9g1279 430 SMART serkin_6 109 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g1279 430 PANTHER OS08G0249100 PROTEIN 1 422 - -
Ahy9g1279 430 SUPERFAMILY Protein kinase-like (PK-like) 89 376 IPR011009 -
Ahy9g1279 430 MobiDBLite consensus disorder prediction 15 36 - -
Ahy9g1279 430 ProSitePatterns Protein kinases ATP-binding region signature. 115 137 IPR017441 GO:0005524
Ahy9g1279 430 MobiDBLite consensus disorder prediction 1 36 - -
Ahy9g1279 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Ahy9g1279 430 Pfam Protein tyrosine and serine/threonine kinase 112 321 IPR001245 GO:0004672|GO:0006468
Ahy9g1279 430 ProSiteProfiles Protein kinase domain profile. 109 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1279 Ahy-Chr9 38531353 38560920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1279 63 385 Receptor kinase-like Gene Family AT1G53420 41.337 1.60e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy9g1279 PK_Tyr_Ser-Thr 1.50E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1279 - - aip:107615479 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0999 16 18050486 18057163 Ahy9g1279 9 38531353 38560920 PCT
Ahy6g0371 6 4551127 4564871 Ahy9g1279 9 38531353 38560920 PCT
Ahy9g1279 9 38531353 38560920 Ahy16g0999 16 18050486 18057163 PCT
Ahy9g1279 9 38531353 38560920 Ahy6g0371 6 4551127 4564871 PCT