Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1269 ATGGCGCTAAAAGCAGTGGTGTATCCACAAAGCCAAGACCCATCATTTGGCTATGGAGTCAATTACAACAACTGCTACCGAAACTGGAGTAACAGCTACAATAATGAAGACCAAAGAGTAGAAACAACATACCCTGCAGAAATATGGAACAATAACAATACTACTTGTTCATCACCGCCATCAGTGTTGCCATCGTCGTGTCGTCCAAAGAGGCGAAGAGCGAAGAGCAGGAAGAACAAAGAGCAGATAGAGAACCAGAGAATGACTCACATTGCAGTGGAGCGCAACAGAAGGAAGCAGATGAATCACTATCTCTCCCTTCTCCGCTCTTTAATGCCGGACTCTTATGTTCAAAGGGGGGATCAAGCTTCAATAATAGGAGGAGCTATTAACTTTGTTAAGGAGCTTGAACAGAAGCTGCAGTTTCTTGGAGCTACATATCAAGAAGGTGAAGATGGGAATAAGAAGAAGAAGAAGAACATGGCCTTTTGTGAATTCTTCACATTCCCACAGTACAGAAGAACAGCAACAGCAACAGCAACAACATCAAGCAGCAGTAGTAACAGTGAGAAATCATCATCATCAAGAACAGTGGCGGGAGAGGAGGAGTTGGGGGAAGTAGCTGCAGACATAGAAGTGACAATGGTGGAGAGCCATGCAAATGTGAAGATAAGGTCAAAGAAGAAGCCAAAGCAGCTGTTGAAGATGGTGTCTGCTTTGCACAACATGAGGCTTACAATCTTGCACCTTAATGTCACCACCACCATCAATCAACTTGTTCTCTACTCTCTCAGTCTTAAGGTGGAAGATGATTGCAAGTTGGGATCAGTGGATGATATTGCTGCAGCTGTATACCAGCTTATGAATAGCATTCAACAAGAGGCACCAATAATCTTAGCTTCAACTAATTAA 912 0.4331 MALKAVVYPQSQDPSFGYGVNYNNCYRNWSNSYNNEDQRVETTYPAEIWNNNNTTCSSPPSVLPSSCRPKRRRAKSRKNKEQIENQRMTHIAVERNRRKQMNHYLSLLRSLMPDSYVQRGDQASIIGGAINFVKELEQKLQFLGATYQEGEDGNKKKKKNMAFCEFFTFPQYRRTATATATTSSSSSNSEKSSSSRTVAGEEELGEVAADIEVTMVESHANVKIRSKKKPKQLLKMVSALHNMRLTILHLNVTTTINQLVLYSLSLKVEDDCKLGSVDDIAAAVYQLMNSIQQEAPIILASTN* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1269 303 SMART finulus 91 142 IPR011598 GO:0046983
Ahy9g1269 303 MobiDBLite consensus disorder prediction 178 200 - -
Ahy9g1269 303 MobiDBLite consensus disorder prediction 178 199 - -
Ahy9g1269 303 Pfam Helix-loop-helix DNA-binding domain 86 137 IPR011598 GO:0046983
Ahy9g1269 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 149 IPR036638 GO:0046983
Ahy9g1269 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 85 136 IPR011598 GO:0046983
Ahy9g1269 303 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 27 295 - -
Ahy9g1269 303 PANTHER MAX DIMERIZATION, MAD 27 295 - -
Ahy9g1269 303 MobiDBLite consensus disorder prediction 55 82 - -
Ahy9g1269 303 Gene3D - 70 154 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1269 Ahy-Chr9 37446839 37449219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1269 1 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 43.312 7.61e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g1269 HLH 7.40E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1269 - - adu:107465443 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1550 19 46375481 46377805 Ahy9g1269 9 37446839 37449219 hybridization
Ahy16g0987 16 17825933 17827601 Ahy9g1269 9 37446839 37449219 PCT
Ahy6g0382 6 4744920 4746303 Ahy9g1269 9 37446839 37449219 PCT
Ahy9g1269 9 37446839 37449219 Ahy16g0987 16 17825933 17827601 PCT
Ahy9g1269 9 37446839 37449219 Ahy6g0382 6 4744920 4746303 PCT