Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1250 ATGAATTTATTTAGTTTATACTTCCTTACATCTCTTTTCCCCATCATTTTTGCAAGGGACGATTCTCAACTGATTGCAAACGTGGTTAATGATGTACTGCAAAAGCGTTACTTGAGGCACCCTATTGAACTAAAAGGCCTTGTTGGAACTGAAGAAATCTGCAGAAATGTCGAATTGTTAATGAAAAGAGTTCGAATAATTGGAATTTGGGGCATGGGTGGAATAGGAAAGACAACCATTGCCAAAGTGTTGTTTGCCAAACTGTTTCCTCAGTATGACAATGTGTGCTTTGTGGTGAAAGAAATCTCAGTTGATAGGCTTCTGTTCGAGCTGTTAAAGGAAGAAATTTCCACATCTAACCTGGTAGGACTCGCATTCGACATGAAGAGGCTTAATAACAAAAAGGTCCTCATTGTGCTAGATGATGTGGATAGTCTTGATCAATTGGAACATTTGTGTAGAGATTTTCGAGATCTAAGTGAAGATAGTCGACTCATCATAACTACAAGAAATAGGCAATTGCTTGCTGGAAGAGTTGATTGGATATATAAGGTTGAGAAATGGAAAGCATCTGAATCTCTACAGCTTTTTAGCCTGGAAGCCTTCAAGGAAACTCATCCTCAAAGGGGTTATGAAGATCTCGCCACAATGGCAGTTAAGTATGCTGGAGGCATTCCCTTAGCTTTGAAAGTTTTGGGTTCGTATCTTCGTTCGAAAAGTATCAAATTTTGGGAAAGTACTTTGAGAAAACTCAACAAGTATCCCAATGAGACGATTGTAAATTTGTTGAAGGTAAGCTATGATGGATTGGATGATCTAGAGAAGAAGATATTCTTGGACATTGCATTTTTTTTCAATGGAGAAGAGAAAGATCATGTCATAAGCATACTAGATGCCTGTGGATTTGAAGCAAGTAGTGGAATAGATGTTCTTGAAGATAAAGCTTTGATAACCATTTCATATAACAACACAATAGAAATGCATGAACTGCTACAAAAAATGGGTTTTGACATAGTGCGTAGAGAATGTAGCGGAGACTTTGCAAGACGAAGTCGATTGAGGGATACTGAAGTTCGTGCTGTACTTAAAGATAATAAGGTAAGAAAATGTAGACAACTTCTTTTAGACATGCTTTCAGTTGGAAACTGTTGCTAA 1155 0.3758 MNLFSLYFLTSLFPIIFARDDSQLIANVVNDVLQKRYLRHPIELKGLVGTEEICRNVELLMKRVRIIGIWGMGGIGKTTIAKVLFAKLFPQYDNVCFVVKEISVDRLLFELLKEEISTSNLVGLAFDMKRLNNKKVLIVLDDVDSLDQLEHLCRDFRDLSEDSRLIITTRNRQLLAGRVDWIYKVEKWKASESLQLFSLEAFKETHPQRGYEDLATMAVKYAGGIPLALKVLGSYLRSKSIKFWESTLRKLNKYPNETIVNLLKVSYDGLDDLEKKIFLDIAFFFNGEEKDHVISILDACGFEASSGIDVLEDKALITISYNNTIEMHELLQKMGFDIVRRECSGDFARRSRLRDTEVRAVLKDNKVRKCRQLLLDMLSVGNCC* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1250 384 Gene3D - 29 180 IPR027417 -
Ahy9g1250 384 Pfam NB-ARC domain 61 257 IPR002182 GO:0043531
Ahy9g1250 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 281 IPR027417 -
Ahy9g1250 384 Gene3D - 188 271 IPR042197 -
Ahy9g1250 384 PANTHER NB-ARC DOMAIN PROTEIN 17 365 - -
Ahy9g1250 384 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 365 IPR044974 GO:0006952
Ahy9g1250 384 SUPERFAMILY "Winged helix" DNA-binding domain 258 343 IPR036390 -
Ahy9g1250 384 PRINTS Disease resistance protein signature 66 81 - -
Ahy9g1250 384 PRINTS Disease resistance protein signature 222 236 - -
Ahy9g1250 384 PRINTS Disease resistance protein signature 130 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1250 Ahy-Chr9 34921240 34922394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1250 64 364 WRKY Transcription Factor Family AT5G45050 40.705 1.09e-54 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1250 - - ahf:114924442 736.873