Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1237 ATGTGCCTTCGTTCTGGGCAGTTTGAGCAGAGGGGCAGAAGCACGGCAGAGACAAAGACTAGGCGCGATCAGGACGATGGATGGCGGCAGAAACACGGTTGGAAAAACGAAGAGCAGACGACGACCGATGTGCTTGAATGGGTCAAATTCTACCAATGGCTTTATTGCTTTTGCAACTACGTTGATCCATCACATGTAAGGTATCAGCTAGGAAGTTACAGTGAAGCGTTTAAAAAACACTTGCAGAATAACAAGAAGGCGGAGGTTCAGAAGTGGAGGGAAGCTCTCACTGTAGCAGCAAATTTAGAAGGCTTGGACTCCCATTCTTATAGGGACGAAATTGAATTCATTCAGAATATTGTCAAAGATGTTTTTCAAAAGCTGATTGACCATTACCCACCCAATGATAGTAAAAGTCTCGTTGGCATTAGTGAAAATCTTGAAAAGGTAGAATCACTATTAAGTGAATCTGTTGAAGTCAAAAAGATTGGAATTTGTGGCATAGGGGGTAGTAAGATCATTATCACAACTAGAGACAAAAATGTGATAGTTCGAACGGTTGAAACAATATATGAGATGAAGATATTAGATTCTCATGAATCATTTAAACTGTTTAGTTTGAATGCATTTAATGAAGACTATCCACAAATTGGATACGAGGAGCTATCATGGAAAGCGGTTGGCTGTTGCAAAGGCATCCCACTAGCCTTAATATCATTGCGTTCTTTTCTTCATTTAAAGAGTAAAACTGAATGGCATAGTGCATTGCAAAAGCTTGAGAAGACACCAAATCCAGAAATTCAAAATATTTTAAGATTGAGTTATGATGGATTAGATGAAGAGGCAAAACAAATTTTTCTAGACATCGCATGTTTTTTTAAGAGAGAGCTTGTAGAATACGTAGTTAATCTGTTAGACAGTTATGGCTTGTATGCAGCTATTGGCATGAGATCCCTTCTTGATAGAGCTTTAATAGCTATATCTCATAATTGTGTGCGGATGCATGACTTGATCCAAGAATTAGGTTGGGATATCGTTTGTCAACAATCTAGTGGAAATTCTGAAAATCGTAGCCACTTGTGGGATTCTAATGATATTCAGGATGTTTTGGGAAACAACAAAGGAACTGATTCTATTGAAAGCATAGTGTTTGATATGTCTCAAATAGCAGATCTATAG 1179 0.3825 MCLRSGQFEQRGRSTAETKTRRDQDDGWRQKHGWKNEEQTTTDVLEWVKFYQWLYCFCNYVDPSHVRYQLGSYSEAFKKHLQNNKKAEVQKWREALTVAANLEGLDSHSYRDEIEFIQNIVKDVFQKLIDHYPPNDSKSLVGISENLEKVESLLSESVEVKKIGICGIGGSKIIITTRDKNVIVRTVETIYEMKILDSHESFKLFSLNAFNEDYPQIGYEELSWKAVGCCKGIPLALISLRSFLHLKSKTEWHSALQKLEKTPNPEIQNILRLSYDGLDEEAKQIFLDIACFFKRELVEYVVNLLDSYGLYAAIGMRSLLDRALIAISHNCVRMHDLIQELGWDIVCQQSSGNSENRSHLWDSNDIQDVLGNNKGTDSIESIVFDMSQIADL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1237 392 MobiDBLite consensus disorder prediction 1 30 - -
Ahy9g1237 392 Gene3D - 18 132 IPR035897 -
Ahy9g1237 392 SUPERFAMILY "Winged helix" DNA-binding domain 266 370 IPR036390 -
Ahy9g1237 392 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 170 381 - -
Ahy9g1237 392 Gene3D - 195 279 IPR042197 -
Ahy9g1237 392 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 170 IPR044974 GO:0006952
Ahy9g1237 392 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 170 381 IPR044974 GO:0006952
Ahy9g1237 392 SUPERFAMILY Toll/Interleukin receptor TIR domain 54 104 IPR035897 -
Ahy9g1237 392 Pfam TIR domain 61 143 IPR000157 GO:0007165
Ahy9g1237 392 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 67 170 - -
Ahy9g1237 392 MobiDBLite consensus disorder prediction 14 30 - -
Ahy9g1237 392 Pfam NB-ARC domain 169 278 IPR002182 GO:0043531
Ahy9g1237 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 289 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1237 Ahy-Chr9 34541001 34543722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1237 171 391 WRKY Transcription Factor Family AT5G45050 35.714 1.80e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1237 - - ahf:114924440 490.345