Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1212 ATGGCGGATTTTCTGACCTCTACCCACCGTGCCAAGTGGATCTTCACTCCTCAACAGTTGGTTGAAAAATATAGAGATGCTAGTCAGAGAGCCATACAAACTTTAGAGAAGTGTGGAGCAACTCTGATGGAAGTAGATAGTGATGGGACAATGTCATATCCTGAACCTCAGAATTCTGTGAAGGATAATGCTGAAAAGCATTCTCGGTCAAAACCTCTCAGTATTGAAGAAGAACAATCTATAAAAGTGTTTTATGAAAACAAGCTACAAGAAGTTTGTAAAAATTTCCACTTCCCTCATAAGATCCAGGCAACGGCCCTTATCTATTTTAAAAGGTTCTACCTGCACTGGTCAGTAATGGAACATCAGCCAAAACATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAACCATGTCTCTGCTGAGGAGCTTGGTAAAGGGATCTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATTGTTTATGCACCATATCGTTCACTTGAAGGTTTTATGGATGATATGGAGGACTTTTGCAATGCTAGCGAGGACCAGCTTCAAATGTTGAAGAGATTACAAGACACAGCTAGATTGGAAATTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGCGCAGTTGGCTTTAGCTGCTTTGCGCAGTTCAGTTGCACTCCATCAAGTTATTGACTTTGACAGTTATCTGAGCAGTTTATTTTCTCGTCAAAACTCCACACATACAATGTCCGAGCTTATTGAAGCACTTAACACAATTGATTCTTTGGTTATGAAATACAAATTTCCTTCAGATAAAGAATTGAAACATATCAATAGGAAACTGAAGTCTTGTTGGGGTCAAAGCTCTCATGACGAGGGAAAGAAGCGAGAGAAGAAATCAAAGCACAAGTCGAAAAAGAGCTCGAGTGAAGCACACAATGCGCCGCCTCCTGCCTAG 1008 0.3948 MADFLTSTHRAKWIFTPQQLVEKYRDASQRAIQTLEKCGATLMEVDSDGTMSYPEPQNSVKDNAEKHSRSKPLSIEEEQSIKVFYENKLQEVCKNFHFPHKIQATALIYFKRFYLHWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSLEGFMDDMEDFCNASEDQLQMLKRLQDTARLEIDKMMLTDAPLLFPPAQLALAALRSSVALHQVIDFDSYLSSLFSRQNSTHTMSELIEALNTIDSLVMKYKFPSDKELKHINRKLKSCWGQSSHDEGKKREKKSKHKSKKSSSEAHNAPPPA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1212 335 MobiDBLite consensus disorder prediction 49 72 - -
Ahy9g1212 335 Pfam Cyclin, N-terminal domain 89 174 IPR006671 -
Ahy9g1212 335 Gene3D - 177 282 - -
Ahy9g1212 335 PANTHER CYCLIN 1 329 IPR043198 GO:0006357|GO:0016538
Ahy9g1212 335 PANTHER CYCLIN-H 1 329 - -
Ahy9g1212 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Ahy9g1212 335 Pfam Cyclin C-terminal domain 179 279 IPR031658 -
Ahy9g1212 335 CDD CYCLIN 89 148 IPR013763 -
Ahy9g1212 335 Gene3D - 63 175 - -
Ahy9g1212 335 MobiDBLite consensus disorder prediction 302 335 - -
Ahy9g1212 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Ahy9g1212 335 SMART cyclin_7 87 168 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1212 Ahy-Chr9 33418911 33426409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1212 1 281 Core Cell Cycle Gene Families AT5G27620 62.633 2.15e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1212 K06634 - gmx:547736 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1500 19 42022506 42029922 Ahy9g1212 9 33418911 33426409 hybridization
Ahy12g0954 12 19983761 19991818 Ahy9g1212 9 33418911 33426409 hybridization
Ahy9g1212 9 33418911 33426409 Ahy16g1376 16 27385166 27390055 PCT
Ahy9g1212 9 33418911 33426409 Ahy6g0083 6 1144336 1149123 PCT