Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1194 ATGGGTGCCAGTAACTTATCCTTCGACCAAGTGCTTGTGGAAATGCTTGAAATGGGTTTTGAGTATTCCAGCATTGTAGAAGCCATTAAAACAGTGGGTTTGTCTATTCCCAATGTTGTGGAGCATATCTTGACGGCTGGTAGTGGTAGTGGTAGAGCTACAACCAGCTCCAAAGCTTCCACTACCACCATACAGCCTTCGAAATTTCGTGCTCCTCATGGAAAAGCACTCAAGAGAAAAGCTTTGTCCTCGACCAGCCAAGTTCGGCAGTCGAGCATATTAGACCATTTTCATACCAATGATAAGTCCACTGTGTGCAATAAGATACATGATGTGGCAATTGTTGATCTAGAAATGGTGAATGAGCACGATGAGCCTATCTCTGAAATGCCTGATGATGTGACCGTGATGCCGGGGCAAATTGTAACTGCTCCAATGGAAAATTTCGTTGTTATGTCTGATTGGGAGACGAGAGTTGGTGGTCTCTTACAGAAGCATTTTGGGATTTTGTGTTTGAAGAGTTTTCAGAAGGAAGCGCTGAACGCATGGGCAGCTCATAAGGACTGCCTTGTCCTTGCTGCAACAGGATCTGGGAAATCATTGTGCTTTCAGGTTCCTGCATTGTTAACTGGGAAAGTGGTGGTTGTGATATCCCCATTAATAAGCTTGATGCATGATCAATGCTTAAAGCTAGCAAGACATGGAGTCAGCGCTTGCTTTCTTGGGTCTGGGCAACCTGACAATACTGTTGAAAAGAAAGCAATGAGAGGCATGTACAGCATAATATATGTTTGTCCAGAGACTGTCCTAAGATTAATACAACCACTGCAGAAGCTTGCAGAAAGTCGTGGTATTGCATTGTTCGCAATTGATGAGGTGCATTGTGTTTCTAAATGGGGTCATGATTTCCGTCCAGACTATAGCCGATTATCTGTGCTGAGGGAAAATTTCAGTACCAGCAAACTTAAATTCCTGGAATTTGACATACCTTTGATGGCCTTGACAGCTACAGCTACACACAGAGTTCAAGAAGATATTTTAAAATCATTACGCATGTCAAAGGAAACAATTTTTGTGCTTACATCTTTTTTTCGATCTAATTTACGCTTCATGGTAAAGCACAGTGGAACTTCACAAGCCTTTTATGAGAAAGATTTTCATGAATTGATCAAAGTATATGGTAGCAAGCTAAATTCCAATAAAAATAAAAAGGCTTTCATCTCAAAGGACTCGGATGATGTTTCCAGCAGCTCTGGTGCTGCTGGAATCTCTGATAATGATGATGTTTCTCCTTATGATGTGGATAACAACCATGATGATTATGGTGGCAGAGACGTTAATGTAATACACTCAGGAAACACAGACAATCTTGTAAAGGGAAAAGAGTTGTCTGTCGAGTTTCTGGAAAATGACAACGATGACTGTCAAAGCGTGGATGACTGGGATGTTACCTGTGGTGAATTTTGTTCTCAATATCGTCCGAAGGACTGGGAGTTATCTGAGATACATGATCCACCCAAGGAACCAGAAGGAAGTCTGAAAGTACTTAAAGGTCCTTTGGAGCAAGGACTGGCAATCATATATGTACCAACGAGAAAAGAAACGCTGAAAATTGCAAAGTATCTATGCAAGTTTGGCGTGAAGGCTGCTGCCTATAATGCAGCGCTGCCCAAATCACATCTAAGAAGGGTTCACAAAGAATTTCATGAAAATACCATAGAGGTTGTTGTTGCAACAATAGCATTTGGCATGGGGATTGACAAGCCAAATGTCAGAAGAATCATCCACTATGGTTGGCCACAGAGTTTGGAAGCCTACTACCAAGAAGCTGGTCGGGCTGGTCGAGATGGGAAATTAGCAGACTGCATTCTATTTGCAAACCTAGCGAGAGTTCCATCACTTTTGCCTAGTCGAAGAAGTGAAGATCAGACAAAACAAGCATATATCATGTTGTCTGACTGTTTCAGATACGGAATGAACACGTCATGCTGTCGAGCAAAGACACTTGTGGAATACTTTGGAGAGGAATTCAGTCATAGAAAATGTCTCTTATGTGATGTGTGTGTTGATGGACCGCCTCAAAGGCAGAATATGAAAGACGAGGCGTGTATATTACTACAAACTATTGCTGCTAGTCATGCATGTAGTTATTCCATGGATTTTTCATATGATGATGATGTACATCTTGAATATGGATATGGAAGACGTGGAGAGAGGTCATGTCTTAAGAATATTGTCGGAAAGATACGGGAGCAGTCTCAAAAGTTTCTAAACACTGATATATTATTGTGGAGAGGTCTCTCTCGGATTTTGGAAGCTAAAGGATACATCAGGGAGGGAGATGACAAGACCCATGTTCAGATAAAATTTCCGGAGCCAACAAAATTGGGATTGGAATTTATCAGGTCCATGAGTGAAGAAGCTTTCTATGTTTACCCAGAGGCAGATATGTTGCTTGCAGCAAAAACTCACAAACCGCATTCCTCATTACCATACTCCTCATTCTCTGAATGGGGTAAAGGTTGGGCTGATCCTGAGATCCGTCGCCAGCGTCTGGAAAGAATGCAAGTCAATAAAAAGCCAGAGACGCTGAGAAGTCCCAGGAAACGTCGAAAGAGAAAAGCCAATAAAATGAAACACGATATGAGGACTTCTCGAGGAAGACTTGAAGCAAAACTCACAAAATATAAGTGA 2694 0.418 MGASNLSFDQVLVEMLEMGFEYSSIVEAIKTVGLSIPNVVEHILTAGSGSGRATTSSKASTTTIQPSKFRAPHGKALKRKALSSTSQVRQSSILDHFHTNDKSTVCNKIHDVAIVDLEMVNEHDEPISEMPDDVTVMPGQIVTAPMENFVVMSDWETRVGGLLQKHFGILCLKSFQKEALNAWAAHKDCLVLAATGSGKSLCFQVPALLTGKVVVVISPLISLMHDQCLKLARHGVSACFLGSGQPDNTVEKKAMRGMYSIIYVCPETVLRLIQPLQKLAESRGIALFAIDEVHCVSKWGHDFRPDYSRLSVLRENFSTSKLKFLEFDIPLMALTATATHRVQEDILKSLRMSKETIFVLTSFFRSNLRFMVKHSGTSQAFYEKDFHELIKVYGSKLNSNKNKKAFISKDSDDVSSSSGAAGISDNDDVSPYDVDNNHDDYGGRDVNVIHSGNTDNLVKGKELSVEFLENDNDDCQSVDDWDVTCGEFCSQYRPKDWELSEIHDPPKEPEGSLKVLKGPLEQGLAIIYVPTRKETLKIAKYLCKFGVKAAAYNAALPKSHLRRVHKEFHENTIEVVVATIAFGMGIDKPNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILFANLARVPSLLPSRRSEDQTKQAYIMLSDCFRYGMNTSCCRAKTLVEYFGEEFSHRKCLLCDVCVDGPPQRQNMKDEACILLQTIAASHACSYSMDFSYDDDVHLEYGYGRRGERSCLKNIVGKIREQSQKFLNTDILLWRGLSRILEAKGYIREGDDKTHVQIKFPEPTKLGLEFIRSMSEEAFYVYPEADMLLAAKTHKPHSSLPYSSFSEWGKGWADPEIRRQRLERMQVNKKPETLRSPRKRRKRKANKMKHDMRTSRGRLEAKLTKYK* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1194 897 Pfam DEAD/DEAH box helicase 175 343 IPR011545 GO:0003676|GO:0005524
Ahy9g1194 897 Gene3D - 141 363 IPR027417 -
Ahy9g1194 897 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE SIM 4 886 - -
Ahy9g1194 897 MobiDBLite consensus disorder prediction 882 897 - -
Ahy9g1194 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 628 IPR027417 -
Ahy9g1194 897 SMART ultradead3 168 373 IPR014001 -
Ahy9g1194 897 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 512 670 IPR001650 -
Ahy9g1194 897 Gene3D - 630 808 IPR036388 -
Ahy9g1194 897 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 7 46 IPR015940 -
Ahy9g1194 897 PANTHER DNA HELICASE RECQ FAMILY MEMBER 4 886 - -
Ahy9g1194 897 Pfam RecQ zinc-binding 638 688 IPR032284 -
Ahy9g1194 897 Pfam Helicase conserved C-terminal domain 516 616 IPR001650 -
Ahy9g1194 897 MobiDBLite consensus disorder prediction 864 881 - -
Ahy9g1194 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 236 IPR027417 -
Ahy9g1194 897 CDD DEXHc_RecQ 163 363 - -
Ahy9g1194 897 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 180 356 IPR014001 -
Ahy9g1194 897 MobiDBLite consensus disorder prediction 408 437 - -
Ahy9g1194 897 Gene3D - 500 625 IPR027417 -
Ahy9g1194 897 SMART helicmild6 536 617 IPR001650 -
Ahy9g1194 897 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 162 377 IPR004589 GO:0004386|GO:0006310
Ahy9g1194 897 MobiDBLite consensus disorder prediction 852 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1194 Ahy-Chr9 31336711 31343203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1194 508 626 Eukaryotic Initiation Factors Gene Family AT5G11170 26.891 2.12e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1194 K10900 - gmx:100793222 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1474 19 39095826 39102222 Ahy9g1194 9 31336711 31343203 hybridization