Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1167 ATGGCCACAAGAACTACCTTGAAGACTCCATTACCAACTACCTTCTTCACCCTTCTTTCCCTCTTGATATTCCTTTCTCCATCTCTTGCTAATGATGATTTCACTTCCTCTCCATGCAACCTCACACCCCACCCTACATTTTGCACTGCCACTCTACCCTCTCCCAATATTTTATCCGTACACGACCAATGCCGGTTCTTCCTTAACCAATCCTTAGTAATAACAAAGAAGATTCTCGAAATGGTCTCTTCTTATCTAAGAGACCGCCGAATGAGAATTCCGGGTTCCACTTTACATGCTATCGAAGACTGCGTCAACTCTGCAGAACTGAACATTGATTTCTTGTCCATTGTCCTCAGAGATGCCGAAAGAACCGCCGCAAATAGCTATCAAGCTCATTATTATGATACACAAACAATGCTTAGCGCCGTCTTAACCAATCATCAAACGTGTATGGACGGTTTTAACGAAGTAACTCCATATCCAAGAATCACCGGGGGATTATCAAGTGTACTGTCAAATGCATACAAGCTTTACAGCGTTTCGCTGGCGCTTTTCGCTCACGGTTGGGTTAAAAACCCGGCCGCAAGACCAAGAACTACCATGAACAGAAAGTTACACCAAACAAACTTAGACGGCGACGAAGGGTTGGTGGTGAGAGAGAAAGTTGTGGTGAATCCGAACGGATCTGGGGATTTCACCACCATAAATGATGCTGTGGATGCAGCACCTAACAATACCGGCACCAACAATGGGTACCATGTTATTTATGTTGTTGCTGGGATTTACAATGAGTACGTGTCCCTGTCGAAGAACAAGCAGAACGTAATGATTGTTGGAGATGGCATCAATCGCACCGTGATCACTGGCAATCGAAGCGTGGTTGATGGATGGACCACTTTCCAATCTGCAACATTCGCTGTAGCTGGAAAAGGGTTTGTAGCAGTGAACATAACATTTCGCAACACAGCGGGCCCCGCCAAGCACCAAGCAGTAGCTGTAAGAAACAGTGCAGATATGTCCACATTCTACACCTGCAGTTTCGAAGGCTATCAAGACACACTGTACACGCATTCTCTAAGACAATTCTACAAAAACTCTGACATTTACGGAACAGTTGACTTTATCTTCGGCAACGCTGCAACTTTGTTTCAAGACTGCAACATCTTTCCAAGACTACCCATGCAAAACCAATTCAACGCTATCACGGCGCAGGGCCGAATGGATCCGAACCAAAACACCGGAATTTCCATTCAGAACTCATGGATCGTTGGAAATGATGGGAACTACAGCAGGGTAGAAACGTATCTGGGAAGGCCTTGGAAGGAGTATTCAAGAACGGTTTACGTGCAGTGTTTCATGGATGGGATAGTTGATGGAAAAGGTTGGGTTGAGTGGAATGGGGATTTTGCATTGAGGACCTTGTATTTTGCGGAATTTGCTAATTGGGGTCCAGGTTCAAATACTACTAATAGGGTCACTTGGGAAGGGTACCATCTGGTGGATGAAAATGATGCAGATGGTTTCACTGTGTACAATTTCATACAAGGTGATTCATGGTTGCCCAAGACTGGAGTGCCCTTCAAAGCTGGGTTATAG 1599 0.4503 MATRTTLKTPLPTTFFTLLSLLIFLSPSLANDDFTSSPCNLTPHPTFCTATLPSPNILSVHDQCRFFLNQSLVITKKILEMVSSYLRDRRMRIPGSTLHAIEDCVNSAELNIDFLSIVLRDAERTAANSYQAHYYDTQTMLSAVLTNHQTCMDGFNEVTPYPRITGGLSSVLSNAYKLYSVSLALFAHGWVKNPAARPRTTMNRKLHQTNLDGDEGLVVREKVVVNPNGSGDFTTINDAVDAAPNNTGTNNGYHVIYVVAGIYNEYVSLSKNKQNVMIVGDGINRTVITGNRSVVDGWTTFQSATFAVAGKGFVAVNITFRNTAGPAKHQAVAVRNSADMSTFYTCSFEGYQDTLYTHSLRQFYKNSDIYGTVDFIFGNAATLFQDCNIFPRLPMQNQFNAITAQGRMDPNQNTGISIQNSWIVGNDGNYSRVETYLGRPWKEYSRTVYVQCFMDGIVDGKGWVEWNGDFALRTLYFAEFANWGPGSNTTNRVTWEGYHLVDENDADGFTVYNFIQGDSWLPKTGVPFKAGL* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1167 532 Gene3D - 217 532 IPR012334 -
Ahy9g1167 532 SMART PMEI_2 30 185 IPR006501 GO:0004857
Ahy9g1167 532 PANTHER PECTINESTERASE 19 531 - -
Ahy9g1167 532 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 188 IPR035513 -
Ahy9g1167 532 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 185 IPR006501 GO:0004857
Ahy9g1167 532 CDD PMEI-like_3 39 190 - -
Ahy9g1167 532 Pfam Pectinesterase 223 518 IPR000070 GO:0030599|GO:0042545
Ahy9g1167 532 ProSitePatterns Pectinesterase signature 2. 369 378 IPR033131 -
Ahy9g1167 532 Pfam Plant invertase/pectin methylesterase inhibitor 36 185 IPR006501 GO:0004857
Ahy9g1167 532 SUPERFAMILY Pectin lyase-like 220 531 IPR011050 -
Ahy9g1167 532 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 19 531 - -
Ahy9g1167 532 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 187 IPR035513 -
Ahy9g1167 532 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1167 Ahy-Chr9 29825607 29829411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1167 6 532 Carbohydrate Esterase AT4G02330 49.562 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1167 K01051 - gmx:100810329 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1444 19 37097514 37101352 Ahy9g1167 9 29825607 29829411 hybridization
Ahy16g0919 16 16497319 16499347 Ahy9g1167 9 29825607 29829411 PCT
Ahy6g0446 6 5422309 5425331 Ahy9g1167 9 29825607 29829411 PCT