Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1154 ATGGGTCATCTTTCTTCAATGTTCAATGGTTTGGCAAAATCACTGGCAATTAAGAAATGGAGGAATTCAGAAAGATGCAGCGGAAGAGAAGCGGCGGAAGCGATGGCAAAGGAAGCAAAAAAGAATGAGTTCTTGTTATGTAGCTCAGGCACTGTTAGTGTTGATGGCTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTCAATCAAGATTGCTGCATAGTCTGGGAAGAATTTGGGTGCCAAGAGGACACGATCTTCTGTGGGATCTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCGAAAAGAGTGAGAGAATCAATGCCGCCATGTTTGCTATGCAATTGGCAAGAGACTCTTTCCCAAGCTTCACTTGATCTTGACCCAGATTCTGGAGATGCCGATGTTGAGGCAGAGAAGATGCAAAACTGTTTTAACATATGGAAGCATTCCTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTCCAGCAGAATCGCAAGATCGATTCGTTTTTCAGTGGAACCACTGCCCTCTCCATTGTTAGACAGGGAGAACTAATTGTGATTGCAAACGTTGGTGACTCGCGTGCTGTATTAGCTACAACATCGGATCATGGGAGTTTGGTACCAATTCAGCTCACAGTAGATTTCAAGCCCAATCTACCTCAGGAAGCAGCTCGAATACTGGAGCGCCAAGGGCGAGTCTTTTGCTTAGAAGACGAGCCGGGGGTGCACAGGGTATGGCTTCCCGACGAAGAGTCGCCGGGGCTGGCCATGTCTAGGGCACTTGGTGACTACAGCGTCAAAGAGTATGGCCTAATCTCGGTGCCTGAGGTAACCCAATGGAACGTAACCACCAGAGACCAGTTTGTTGTGCTAGCTACTGATGGGGTGTGGGATGTAATATCGAACGAAGAAGCGGTGGAGATTGTATCTTCAACAGCAGAGAGAGGAAAGTCAGCAAAACGTTTGGTGGAGTGTGCGAAGCGTTCATGGAAACGCAAGAGGGGTGGAATTGCCATGGATGACATCTCTGCCATTTGTCTTTTCTTTCACTCTCCTTGTAACCTTCTTGATAACCAACTTGCCACCCTAAACTAA 1119 0.4727 MGHLSSMFNGLAKSLAIKKWRNSERCSGREAAEAMAKEAKKNEFLLCSSGTVSVDGSNNFASVFSKRGKKGVNQDCCIVWEEFGCQEDTIFCGIFDGHGPWGHFVAKRVRESMPPCLLCNWQETLSQASLDLDPDSGDADVEAEKMQNCFNIWKHSYLKTCAAIDRELQQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDHGSLVPIQLTVDFKPNLPQEAARILERQGRVFCLEDEPGVHRVWLPDEESPGLAMSRALGDYSVKEYGLISVPEVTQWNVTTRDQFVVLATDGVWDVISNEEAVEIVSSTAERGKSAKRLVECAKRSWKRKRGGIAMDDISAICLFFHSPCNLLDNQLATLN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1154 372 CDD PP2Cc 59 357 IPR001932 -
Ahy9g1154 372 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 360 - -
Ahy9g1154 372 Gene3D - 51 359 IPR036457 -
Ahy9g1154 372 SUPERFAMILY PP2C-like 54 359 IPR036457 -
Ahy9g1154 372 Pfam Protein phosphatase 2C 80 330 IPR001932 -
Ahy9g1154 372 SMART PP2C_4 51 355 IPR001932 -
Ahy9g1154 372 ProSiteProfiles PPM-type phosphatase domain profile. 60 357 IPR001932 -
Ahy9g1154 372 PANTHER ALPHABET, ISOFORM E-RELATED 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1154 Ahy-Chr9 27912066 27916967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1154 1 358 PP2C-type Phosphatase Gene Family AT3G05640 68.889 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1154 - - gmx:100794039 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1434 19 35945023 35949640 Ahy9g1154 9 27912066 27916967 hybridization
Ahy16g0912 16 16352189 16355515 Ahy9g1154 9 27912066 27916967 PCT
Ahy6g0453 6 5510317 5513925 Ahy9g1154 9 27912066 27916967 PCT
Ahy9g1154 9 27912066 27916967 Ahy16g0912 16 16352189 16355515 PCT
Ahy9g1154 9 27912066 27916967 Ahy6g0453 6 5510317 5513925 PCT