Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1145 ATGTCATCAACATCAAAACCATCCCGTTCTCTTTTTATGCTGCCCTATACACCAGAGAACTTCAATGACACTTCTGGTCGTTCATCTTCACGCCGTGACGGTGCCATTTGCTGCTTTGAATTCGAAGAGGATGATTATGTTCAAACCTTGCCTCTTTGCTCACAAACATTCCATATTGATTACATCGATGCTTGGCTTTGTTCCCACACAAACTGCCCTCTCTGCCGCTCTGGGGTTCTCTCTGCCGCTTCGCTGTTTACTCCCATGTTTGCTACCAGGATCTTACCAAGTCTTGACGCCGATGAATATGGCTCGAAATCAGCAGGAGAAGTAACGGATTAG 342 0.462 MSSTSKPSRSLFMLPYTPENFNDTSGRSSSRRDGAICCFEFEEDDYVQTLPLCSQTFHIDYIDAWLCSHTNCPLCRSGVLSAASLFTPMFATRILPSLDADEYGSKSAGEVTD* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1145 113 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 27 99 - -
Ahy9g1145 113 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 27 99 IPR044675 -
Ahy9g1145 113 SUPERFAMILY RING/U-box 35 82 - -
Ahy9g1145 113 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 80 IPR013083 -
Ahy9g1145 113 Pfam Ring finger domain 36 76 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1145 Ahy-Chr9 27614602 27614943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1145 32 112 C3H Transcription Factor Family AT3G18930 52.273 3.05e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1145 - K19041 adu:107465258 229.18