Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1113 ATGGAGAGCGACACGCTTCTTCCTCACACCACCGTTTCTTGGACCGAACACAGCAATGACATTGGAATTTCCATGAATGCCCCTCTCACTTCCTTCAAATCCATACTCCAACCTCCTCCAATTACCATAAACCCCTTCCCGTTCCCACAACAACATACCGCACCCACTCTCACTACTACTGCTGATGATGACAACTTTCTCACACACCAAAACATGGACTCCTTCGCTCCGGAACACTCTTTCTTTACTCCCAAAGCCTCTTTCTTCAACAACAATCCTTTTGATAATGCCTTCGATTTGGGACCTGACGCCGGTTTCTTCTTCTCCGGGAACCATTCTTCTCAAACTGGCTCGCCTGACATCCCGCCGGCGACTCGGCTGCTCCCGGCGGGGGCCACCGACGATGATCCCGTGGCACTGGGTGCTGGATTTGGTGCCTCCGCTGCGTTTGAAATGGAGGCAGTTGGTGGTTCTGGAAACGCTCTGTTTTCGGGCAAGGGAAATGGATTGGAAGCTTTGGTAGTGAGTAATTTGAAGAGGGTGCAGGAAGTTGAAGAAGCTAGCAATGAAGGTTCAATGTGGAATTCTGAAGAGGATGATGAGAGAACTGATGAGGTGGTGGTTGAGGAGAGTGGGAAGAAGAAGAAGAAGAAGGGGATGCCGTCCAAAAATCTTATGGCGGAGAGGCGGCGAAGGAAGAAGCTCAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCAAATATTAGCAAGATGGATAGAGTTTCGATACTTGGAGATGCAATTGACTACATGAAGGAGTTACAGCAGCGGGTCAATGATCTTCAAAATGAACTGGAGTCAACTCCAACTAGCTCTTCGCCATCATCTTCCACCAGCATTCAACCTTTGACACCCACACTGCAAACCCTTCCTTGCCGGGTGAAGGAAGAACTGTGTCCCGTGCCAATCCCAGGAAACCAAACAGCAAAGGTGGAAGTTAAGGTAAGGGACGGCAAAGCTGTCAACATTCACATGTTTTGTAGCCGCCGACCAGGTCTTCTGGTCTCTACAATGCAGGCTTTGGATAACCTCGGATTAGATGTTCAACAAGCTGTTATTAGCTGCTTCAATGGTTTTGCTTTAGACATCTTCAAAGCTGAGCAATGCAGAGAAGGGCAGGATGTGCTTCCTGAGGAAATCAAAGCAGGTCTGCTGGATTCAGCAGGATCCAAATAA 1218 0.486 MESDTLLPHTTVSWTEHSNDIGISMNAPLTSFKSILQPPPITINPFPFPQQHTAPTLTTTADDDNFLTHQNMDSFAPEHSFFTPKASFFNNNPFDNAFDLGPDAGFFFSGNHSSQTGSPDIPPATRLLPAGATDDDPVALGAGFGASAAFEMEAVGGSGNALFSGKGNGLEALVVSNLKRVQEVEEASNEGSMWNSEEDDERTDEVVVEESGKKKKKKGMPSKNLMAERRRRKKLNDRLYMLRSVVPNISKMDRVSILGDAIDYMKELQQRVNDLQNELESTPTSSSPSSSTSIQPLTPTLQTLPCRVKEELCPVPIPGNQTAKVEVKVRDGKAVNIHMFCSRRPGLLVSTMQALDNLGLDVQQAVISCFNGFALDIFKAEQCREGQDVLPEEIKAGLLDSAGSK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1113 405 MobiDBLite consensus disorder prediction 186 225 - -
Ahy9g1113 405 Gene3D - 209 283 IPR036638 GO:0046983
Ahy9g1113 405 Pfam Helix-loop-helix DNA-binding domain 226 269 IPR011598 GO:0046983
Ahy9g1113 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 219 268 IPR011598 GO:0046983
Ahy9g1113 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 222 286 IPR036638 GO:0046983
Ahy9g1113 405 MobiDBLite consensus disorder prediction 206 225 - -
Ahy9g1113 405 CDD bHLH_AtAMS_like 222 280 - -
Ahy9g1113 405 Coils Coil 258 285 - -
Ahy9g1113 405 PANTHER BHLH TRANSCRIPTIONAL FACTOR 189 403 - -
Ahy9g1113 405 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 189 403 - -
Ahy9g1113 405 MobiDBLite consensus disorder prediction 276 297 - -
Ahy9g1113 405 SMART finulus 225 274 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1113 Ahy-Chr9 25625625 25632926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1113 92 381 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 51.312 1.30e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g1113 HLH 4.20E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1113 - - ahf:112779394 699.508